Evidence map›Paper›PMID 25493284›Full record

ArticleAnnals of clinical and translational neurology2014

A novel dysferlin mutant pseudoexon bypassed with antisense oligonucleotides.

Janice A Dominov, Ozgün Uyan, Peter C Sapp, Diane McKenna-Yasek, Babi R R Nallamilli, Madhuri Hegde, Robert H Brown

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical and translational neurology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

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  12. Correction of pseudoexon splicing caused by a novel intronic dysferlin mutation.Annals of clinical and translational neurology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Janice A DominovNeurology Department, University of Massachusetts Medical School Worcester, Massachusetts, 01605.
Ozgün UyanNeurology Department, University of Massachusetts Medical School Worcester, Massachusetts, 01605.
Peter C SappNeurology Department, University of Massachusetts Medical School Worcester, Massachusetts, 01605.
Diane McKenna-YasekNeurology Department, University of Massachusetts Medical School Worcester, Massachusetts, 01605.
Babi R R NallamilliDepartment of Human Genetics, Emory University School of Medicine Atlanta, Georgia, 30322.
Madhuri HegdeDepartment of Human Genetics, Emory University School of Medicine Atlanta, Georgia, 30322.
Robert H BrownNeurology Department, University of Massachusetts Medical School Worcester, Massachusetts, 01605.
University of Massachusetts Chan Medical School · USEmory University · US

Funding

Identification of genes causative for familial ALS gene using exome sequencingR01NS073873 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LANDERS, JOHN E · 2011 to 2019
$4.6M
High Throughput Screening for Compounds to Mitigate Toxicity of FUS/TLS & SOD1R01NS079836 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BROWN, ROBERT H. · 2012 to 2015
$1.9M
Characterization of KIFAP3, a Modifier of Survival in Sporadic ALSR01NS065847 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LANDERS, JOHN E · 2010 to 2014
$1.8M
FDA HHS R01 FD004127NINDS NIH HHS R01 NS065847NINDS NIH HHS R01 NS073873NINDS NIH HHS R01 NS079836
6 · The paper itself

Abstract

objectiveMutations in dysferlin (DYSF), a Ca(2+)-sensitive ferlin family protein important for membrane repair, vesicle trafficking, and T-tubule function, cause Miyoshi myopathy, limb-girdle muscular dystrophy type 2B, and distal myopathy. More than 330 pathogenic DYSF mutations have been identified within exons or near exon-intron junctions. In ~17% of patients who lack normal DYSF, only a single disease-causing mutation has been identified. We studied one family with one known mutant allele to identify both the second underlying genetic defect and potential therapeutic approaches.

methodsWe sequenced the full DYSF cDNA and investigated antisense oligonucleotides (AONs) as a tool to modify splicing of the mRNA transcripts in order to process out mutant sequences.

resultsWe identified a novel pseudoexon between exons 44 and 45, (pseudoexon 44.1, PE44.1), which inserts an additional 177 nucleotides into the mRNA and 59 amino acids within the conserved C2F domain of the DYSF protein. Two unrelated dysferlinopathy patients were also found to carry this mutation. Using AONs targeting PE44.1, we blocked the abnormal splicing event, yielding normal, full-length DYSF mRNA, and increased DYSF protein expression.

interpretationThis is the first report of a deep intronic mutation in DYSF that alters mRNA splicing to include a mutant peptide fragment within a key DYSF domain. We report that AON-mediated exon-skipping restores production of normal, full-length DYSF in patients' cells in vitro, offering hope that this approach will be therapeutic in this genetic context, and providing a foundation for AON therapeutics targeting other pathogenic DYSF alleles.

Identifiers

PMID25493284
PMCPMC4241797
OpenAlexW2114635715

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.