Evidence map›Paper›PMID 25489855›Full record

ArticleJournal of visualized experiments : JoVE2014

In vitro analysis of MyD88-mediated cellular immune response to West Nile virus mutant strain infection.

Guorui Xie, Melissa C Whiteman, Jason A Wicker, Alan D T Barrett, Tian Wang

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Guorui XieDepartment of Microbiology & Immunology, The University of Texas Medical Branch.
Melissa C WhitemanDepartment of Pathology, The University of Texas Medical Branch.
Jason A WickerDepartment of Pathology, The University of Texas Medical Branch.
Alan D T BarrettDepartment of Microbiology & Immunology, The University of Texas Medical Branch; Department of Pathology, The University of Texas Medical Branch; Center for Biodefense and Emerging Infectious Diseases, Sealy Center for Vaccine Development, The University of Texas Medical Branch.
Tian WangDepartment of Microbiology & Immunology, The University of Texas Medical Branch; Department of Pathology, The University of Texas Medical Branch; Center for Biodefense and Emerging Infectious Diseases, Sealy Center for Vaccine Development, The University of Texas Medical Branch; ti1wang@utmb.edu.

Funding

Gammadelta T cell Regulation of Adaptive Immunity in West Nile Virus InfectionR01AI072060 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI WANG, TIAN · 2008 to 2012
$1.9M
Rational Development of Candidate Attenuated Flavivirus VaccinesR01AI099123 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI WANG, TIAN · 2013 to 2016
$1.8M
NIAID NIH HHS R01 AI072060NIAID NIH HHS R01AI072060NIAID NIH HHS R01 AI099123NIAID NIH HHS R01AI099123
6 · The paper itself

Abstract

An attenuated West Nile virus (WNV), a nonstructural (NS) 4B-P38G mutant, induced higher innate cytokine and T cell responses than the wild-type WNV in mice. Recently, myeloid differentiation factor 88 (MyD88) signaling was shown to be important for initial T cell priming and memory T cell development during WNV NS4B-P38G mutant infection. In this study, two flow cytometry-based methods - an in vitro T cell priming assay and an intracellular cytokine staining (ICS) - were utilized to assess dendritic cells (DCs) and T cell functions. In the T cell priming assay, cell proliferation was analyzed by flow cytometry following co-culture of DCs from both groups of mice with carboxyfluorescein succinimidyl ester (CFSE) - labeled CD4(+) T cells of OTII transgenic mice. This approach provided an accurate determination of the percentage of proliferating CD4(+) T cells with significantly improved overall sensitivity than the traditional assays with radioactive reagents. A microcentrifuge tube system was used in both cell culture and cytokine staining procedures of the ICS protocol. Compared to the traditional tissue culture plate-based system, this modified procedure was easier to perform at biosafety level (BL) 3 facilities. Moreover, WNV- infected cells were treated with paraformaldehyde in both assays, which enabled further analysis outside BL3 facilities. Overall, these in vitro immunological assays can be used to efficiently assess cell-mediated immune responses during WNV infection.

Indexed as

AnimalsAntigen PresentationCoculture TechniquesCytokinesDendritic CellsEpitopes, T-LymphocyteFemaleFlow CytometryImmunity, CellularMaleMiceMice, Inbred C57BLMice, TransgenicMyeloid Differentiation Factor 88Signal TransductionT-LymphocytesCytokinesEpitopes, T-LymphocyteMyd88 protein, mouseMyeloid Differentiation Factor 88

Identifiers

PMID25489855
PMCPMC4354393

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.