Evidence map›Paper›PMID 25486977›Full record

ArticleRetrovirology2014

The microRNA miR-29a is associated with human immunodeficiency virus latency.

Paresh Patel, Mohammad Yunus Ansari, Shraddha Bapat, Madhuri Thakar, Raman Gangakhedkar, Shahid Jameel

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 53 citations in OpenAlex.

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  15. HibeRNAtion: HIV-1 RNA Metabolism and Viral Latency.Frontiers in cellular and infection microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Paresh PatelInternational Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. paresh.icgeb@gmail.com.
Mohammad Yunus AnsariInternational Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. yunusbiotech@gmail.com.
Shraddha BapatNational AIDS Research Institute, Pune, India. shradsbapat@gmail.com.
Madhuri ThakarNational AIDS Research Institute, Pune, India. mthakar@nariindia.org.
Raman GangakhedkarNational AIDS Research Institute, Pune, India. rgangakhedkar@nariindia.org.
Shahid JameelInternational Centre for Genetic Engineering and Biotechnology, New Delhi, 110067, India. jameelshahid@gmail.com.
National AIDS Research Institute · INInternational Centre for Genetic Engineering and Biotechnology · ITInternational Centre for Genetic Engineering and Biotechnology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLatent reservoirs of HIV-1 provide a major challenge to its cure. There are increasing reports of interplay between HIV-1 replication and host miRNAs. Several host miRNAs, which potentially target the nef-3'LTR region of HIV-1 RNA, including miR-29a, are proposed to promote latency.

findingsWe used two established cellular models of HIV-1 latency - the U1 monocytic and J1.1 CD4+ T cell lines to show an inverse relationship between HIV-1 replication and miR-29a levels, which was mediated by the HIV-1 Nef protein. Using a miR-29a responsive luciferase reporter plasmid, an expression plasmid and an anti-miR29a LNA, we further demonstrate increased miR-29a levels during latency and reduced levels following active HIV replication. Finally, we show that miR-29a levels in the PBMCs and plasma of HIV infected persons also correlate inversely with latency and active viral replication.

conclusionsThe levels of miR-29a correlate inversely with active HIV-1 replication in cell culture models and in HIV infected persons. This links miR-29a to viral latency and suggests another approach to activate and destroy latent HIV-1 reservoirs.

Indexed as

Host-Pathogen InteractionsVirus LatencyCD4-Positive T-LymphocytesCell LineCohort StudiesHIV-1HumansMicroRNAsMonocytesVirus ReplicationMicroRNAsMIRN29a microRNA, human

Identifiers

PMID25486977
PMCPMC4269869
OpenAlexW2138328510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.