Evidence map›Paper›PMID 25486568›Full record

ArticleCell cycle (Georgetown, Tex.)2014

Cyclin B3 and dynein heavy chain cooperate to increase fitness in the absence of mdf-1/MAD1 in Caenorhabditis elegans.

Maja Tarailo-Graovac, Tammy Wong, Zhaozhao Qin, Stephane Flibotte, Jon Taylor, Donald G Moerman, Ann M Rose, Nansheng Chen

Abstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Maja Tarailo-Graovaca Department of Molecular Biology and Biochemistry ; Simon Fraser University ; Burnaby , BC Canada.
Tammy Wong
Zhaozhao Qin
Stephane Flibotte
Jon Taylor
Donald G Moerman
Ann M Rose
Nansheng Chen

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Spindle assembly checkpoint (SAC) ensures genome stability by delaying anaphase onset until all the chromosomes have achieved proper spindle attachment. Once correct attachment has been achieved, SAC must be silenced. In the absence of mdf-1/MAD1, an essential SAC component, Caenorhabditis elegans cannot propagate beyond 3 generations. Previously, in a dog-1(gk10)/FANCJ mutator background, we isolated a suppressor of mdf-1(gk2) sterility (such-4) which allowed indefinite propagation in the absence of MDF-1. We showed that such-4 is a Cyclin B3 (cyb-3) duplication. Here we analyze mdf-1 such-4; dog-1, which we propagated for 470 generations, with freezing of samples for long time storage at F170 and F270. Phenotypic analysis of this strain revealed additional suppression of sterility in the absence of MDF-1, beyond the effects of such-4. We applied oligonucleotide array Comparative Genomic Hybridization (oaCGH) and whole genome sequencing (WGS) and identified a further amplification of cyb-3 (triplication) and a new missense mutation in dynein heavy chain (dhc-1). We show that dhc-1(dot168) suppresses the mdf-1(gk2), and is the second cloned suppressor, next to cyb-3 duplication, that does not cause a delay in anaphase onset. We also show that amplification of cyb-3 and dhc-1(dot168) cooperate to increase fitness in the absence of MDF-1.

Indexed as

Amino Acid SequenceAnaphaseAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell Cycle ProteinsComparative Genomic HybridizationCyclin BCytoplasmic DyneinsDNA HelicasesGenotypeHumansMolecular Sequence DataMutationNuclear ProteinsPhenotypeCaenorhabditis elegans ProteinsCell Cycle ProteinsCYB-3 protein, C elegansCyclin BCytoplasmic DyneinsDHC-1 protein, C elegansDNA HelicasesDog-1 protein, C elegansMDF-1 protein, C elegansNuclear ProteinsAPC/C, anaphase promoting complex/cyclosomeCIN, chromosome instabilityCyclin B3 (cyb-3)dynein heavy chain (dhc-1)EMS, ethyl methanesulfonategenome stabilityHim, high incidence of malesmdf-1/MAD1oaCGH, oligonucleotide array Comparative Genomic HybridizationSAC, spindle assembly checkpointspindle assembly checkpoint (SAC)WGS, whole genome sequencing

Identifiers

PMID25486568
PMCPMC4614836

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.