Evidence map›Paper›PMID 25486282›Full record

ArticlePloS one2014

Crystal structure of the fibre head domain of the Atadenovirus Snake Adenovirus 1.

Abhimanyu K Singh, Rosa Menéndez-Conejero, Carmen San Martín, Mark J van Raaij

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Adenovirus Structure: What Is New?International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Abhimanyu K SinghDepartamento de Estructura de Macromoleculas, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain; NanoBiomedicine Initiative, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Rosa Menéndez-ConejeroDepartamento de Estructura de Macromoleculas, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain; NanoBiomedicine Initiative, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Carmen San MartínDepartamento de Estructura de Macromoleculas, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain; NanoBiomedicine Initiative, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Mark J van RaaijDepartamento de Estructura de Macromoleculas, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain; NanoBiomedicine Initiative, Centro Nacional de Biotecnologia (CNB-CSIC), Madrid, Spain.
Centro Nacional de Biotecnología · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenoviruses are non-enveloped icosahedral viruses with trimeric fibre proteins protruding from their vertices. There are five known genera, from which only Mastadenoviruses have been widely studied. Apart from studying adenovirus as a biological model system and with a view to prevent or combat viral infection, there is a major interest in using adenovirus for vaccination, cancer therapy and gene therapy purposes. Adenoviruses from the Atadenovirus genus have been isolated from squamate reptile hosts, ruminants and birds and have a characteristic gene organization and capsid morphology. The carboxy-terminal virus-distal fibre head domains are likely responsible for primary receptor recognition. We determined the high-resolution crystal structure of the Snake Adenovirus 1 (SnAdV-1) fibre head using the multi-wavelength anomalous dispersion (MAD) method. Despite the absence of significant sequence homology, this Atadenovirus fibre head has the same beta-sandwich propeller topology as other adenovirus fibre heads. However, it is about half the size, mainly due to much shorter loops connecting the beta-strands. The detailed structure of the SnAdV-1 fibre head and other animal adenovirus fibre heads, together with the future identification of their natural receptors, may lead to the development of new strategies to target adenovirus vectors to cells of interest.

Indexed as

AdenoviridaeModels, MolecularProtein ConformationProtein Interaction Domains and MotifsAnimalsCapsid ProteinsCarrier ProteinsCrystallography, X-RayProtein BindingSnakesCapsid ProteinsCarrier Proteinshexon capsid protein, Adenovirus

Identifiers

PMID25486282
PMCPMC4259310
OpenAlexW2229767796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.