Evidence map›Paper›PMID 25486192›Full record

ArticleCell cycle (Georgetown, Tex.)2014

DNA end resection is needed for the repair of complex lesions in G1-phase human cells.

Nicole B Averbeck, Oliver Ringel, Maren Herrlitz, Burkhard Jakob, Marco Durante, Gisela Taucher-Scholz

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 90 citations in OpenAlex.

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  9. A perspective on tumor radiation resistance following high-LET radiation treatment.Journal of cancer research and clinical oncology · 2024
    Review
  10. Key molecular DNA damage responses of human cells to radiation.Frontiers in cell and developmental biology · 2024
    Review
  11. High-LET charged particles: radiobiology and application for new approaches in radiotherapy.Strahlentherapie und Onkologie : Organ der Deutschen Rontgengesellschaft ... [et al] · 2023
    Review
  12. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nicole B Averbecka Department of Biophysics ; GSI Helmholtzzentrum für Schwerionenforschung GmbH ; Planckstraße 1; Darmstadt , Germany.
Oliver Ringel
Maren Herrlitz
Burkhard Jakob
Marco Durante
Gisela Taucher-Scholz
GSI Helmholtz Centre for Heavy Ion Research · DETechnical University of Darmstadt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Repair of DNA double strand breaks (DSBs) is influenced by the chemical complexity of the lesion. Clustered lesions (complex DSBs) are generally considered more difficult to repair and responsible for early and late cellular effects after exposure to genotoxic agents. Resection is commonly used by the cells as part of the homologous recombination (HR) pathway in S- and G2-phase. In contrast, DNA resection in G1-phase may lead to an error-prone microhomology-mediated end joining. We induced DNA lesions with a wide range of complexity by irradiation of mammalian cells with X-rays or accelerated ions of different velocity and mass. We found replication protein A (RPA) foci indicating DSB resection both in S/G2- and G1-cells, and the fraction of resection-positive cells correlates with the severity of lesion complexity throughout the cell cycle. Besides RPA, Ataxia telangiectasia and Rad3-related (ATR) was recruited to complex DSBs both in S/G2- and G1-cells. Resection of complex DSBs is driven by meiotic recombination 11 homolog A (MRE11), CTBP-interacting protein (CtIP), and exonuclease 1 (EXO1) but seems not controlled by the Ku heterodimer or by phosphorylation of H2AX. Reduced resection capacity by CtIP depletion increased cell killing and the fraction of unrepaired DSBs after exposure to densely ionizing heavy ions, but not to X-rays. We conclude that in mammalian cells resection is essential for repair of complex DSBs in all phases of the cell-cycle and targeting this process sensitizes mammalian cells to cytotoxic agents inducing clustered breaks, such as in heavy-ion cancer therapy.

Indexed as

DNA End-Joining RepairG1 PhaseCell LineDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA Repair EnzymesExodeoxyribonucleasesG2 PhaseHistonesHumansMRE11 Homologue ProteinPhosphorylationS PhaseX-RaysDNA-Binding ProteinsDNA Repair EnzymesEXO1 protein, humanExodeoxyribonucleasesH2AX protein, humanHistonesMRE11 Homologue ProteinMRE11 protein, humanATM, Ataxia telangiectasia mutatedATR, Ataxia telangiectasia and Rad3-relatedBLM, Bloom syndrome proteinBRCA1, breast cancer 1, early onsetCENP-F, centromere protein Fcomplex DNA damageCtIPCtIP, CTBP-interacting proteinDAPI, 4',6-diamidino-2-phenylindoledouble-strand break repairDSB, double strand breakEXO1EXO1, exonuclease 1FCS, fetal calf serumHR, homologous recombinationIR, ionizing radiationkd, knockdownLET, linear energy transferMEF, mouse embryonic fibroblastsMMEJ, microhomology-mediated end joiningMRE11MRE11, meiotic recombination 11 homolog ANHEJ, none homologous end joiningPARP, poly (ADP-ribose) polymeraseRAD51, DNA repair protein RAD51 homolog 1resection in G1-phaseRPA, replication protein AsiRNA, small interfering RNAssDNA, single stranded DNAWRN, Werner syndromewt, wild-type

Identifiers

PMID25486192
PMCPMC4615131
OpenAlexW2081106563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.