Evidence map›Paper›PMID 25485983›Full record

ArticlePloS one2014

Increased N-glycosylation efficiency by generation of an aromatic sequon on N135 of antithrombin.

Sonia Aguila, Irene Martínez-Martínez, Gilda Dichiara, Ricardo Gutiérrez-Gallego, José Navarro-Fernández, Vicente Vicente, Javier Corral

Erratum issued Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT02503267 ("Incidence and Consequences of Disorders of Glycosylation in Patients With Conotruncal and Septal Heart Defects"), which is not on this map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02503267 unknown statusnot on this mapstarted 2015, after this paper: background citation

"Incidence and Consequences of Disorders of Glycosylation in Patients With Conotruncal and Septal Heart Defects" (CARDIoG)

TypeobservationalSponsorHospital Universitari Vall d'Hebron Research InstituteRan2015 to 2017Enrolled300ConditionsCongenital Heart Diseases, Conotruncal Defects, Congenital Disorder of Glycosylation, Antithrombin III DeficiencyArmsnone intervention
3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sonia AguilaCentro Regional de Hemodonación, Hospital Morales Meseguer, Universidad de Murcia, IMIB, Murcia, Spain.
Irene Martínez-MartínezCentro Regional de Hemodonación, Hospital Morales Meseguer, Universidad de Murcia, IMIB, Murcia, Spain.
Gilda DichiaraDivision of Cardiovascular Sciences, Laboratory of Thrombosis and Haemostasis, Centre for Applied Medical Research, University of Navarra, Pamplona, Spain.
Ricardo Gutiérrez-GallegoBioanalysis Group, IMIM-Hospital del Mar, Department of Experimental and Health Sciences, University Pompeu Fabra (UPF), Barcelona, Spain; Protein and Peptide Chemistry, Anapharm Biotech, Barcelona, Spain.
José Navarro-FernándezCentro Regional de Hemodonación, Hospital Morales Meseguer, Universidad de Murcia, IMIB, Murcia, Spain.
Vicente VicenteCentro Regional de Hemodonación, Hospital Morales Meseguer, Universidad de Murcia, IMIB, Murcia, Spain.
Javier CorralCentro Regional de Hemodonación, Hospital Morales Meseguer, Universidad de Murcia, IMIB, Murcia, Spain.
Centro Regional de Hemodonación · ESUniversidad de Murcia · ESMunicipal Institute for Medical Research · ESUniversidad de Navarra · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inefficient glycosylation of consensus sequence on N135 in antithrombin explains the two glycoforms of this key anticoagulant serpin found in plasma: α and β, with four and three N-glycans, respectively. The lack of this N-glycan increases the heparin affinity of the β-glycoform. Recent studies have demonstrated that an aromatic sequon (Phe-Y-Asn-X-Thr) in reverse β-turns enhances N-glycosylation efficiency and stability of different proteins. We evaluated the effect of the aromatic sequon in this defective glycosylation site of antithrombin, despite of being located in a loop between the helix D and the strand 2A. We analyzed the biochemical and functional features of variants generated in a recombinant cell system (HEK-EBNA). Cells transfected with wild-type plasmid (K133-Y-N135-X-S137) generated 50% of α and β-antithrombin. The S137T, as previously reported, K133F, and the double mutant (K133F/S137T) had improved glycosylation efficiency, leading to the secretion of α-antithrombin, as shown by electrophoretic and mass analysis. The presence of the aromatic sequon did not significantly affect the stability of this conformationally sensitive serpin, as revealed by thermal denaturation assay. Moreover, the aromatic sequon hindered the activation induced by heparin, in which is involved the helix D. Accordingly, K133F and particularly K133F/S137T mutants had a reduced anticoagulant activity. Our data support that aromatic sequons in a different structural context from reverse turns might also improve the efficiency of N-glycosylation.

Indexed as

Antithrombin IIIGlycosylationHeparinHumansModels, MolecularMutagenesis, Site-DirectedMutationProtein FoldingProtein Structure, TertiaryRecombinant ProteinsThermodynamicsAntithrombin IIIHeparinRecombinant Proteins

Identifiers

PMID25485983
PMCPMC4259341
OpenAlexW1965250177

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.