Evidence map›Paper›PMID 25485585›Full record

ArticleCell cycle (Georgetown, Tex.)2014

Histone H3 K27 acetylation marks a potent enhancer element on the adipogenic master regulator gene Pparg2.

Muhammad Khairul Ramlee, Qiongyi Zhang, Muhammad Idris, Xu Peng, Choon Kiat Sim, Weiping Han, Feng Xu

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Cis-Regulatory Elements in Mammals.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Muhammad Khairul Ramleea Singapore Institute for Clinical Sciences ; Agency for Science ; Technology and Research (A*STAR ); Singapore.
Qiongyi Zhang
Muhammad Idris
Xu Peng
Choon Kiat Sim
Weiping Han
Feng Xu
Agency for Science, Technology and Research · SGYong In University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PPARγ2 is expressed almost exclusively in adipose tissue and plays a central role in adipogenesis. Despite intensive studies over the last 2 decades, the mechanism regulating the expression of the Pparg2 gene, especially the role of cis-regulatory elements, is still not completely understood. Here, we report a comprehensive investigation of the enhancer elements within the murine Pparg2 gene. Utilizing the combined techniques of sequence conservation analysis and chromatin marker examination, we identified a potent enhancer element that augmented the expression of a reporter gene under the control of the Pparg2 promoter by 20-fold. This enhancer element was first identified as highly conserved non-coding sequence 10 (CNS10) and was later shown to be enriched with the enhancer marker H3 K27 acetylation. Further studies identified a binding site for p300 as the essential enhancer element in CNS10. Moreover, p300 physically binds to CNS10 and is required for the enhancer activity of CNS10. The depletion of p300 by siRNA resulted in significantly impaired activation of Pparg2 at the early stages of 3T3-L1 adipogenesis. In summary, our study identified a novel enhancer element on the murine Pparg2 gene and suggested a novel mechanism for the regulation of Pparg2 expression by p300 in 3T3-L1 adipogenesis.

Indexed as

3T3-L1 CellsAcetylationAdipogenesisAdipose TissueAnimalsBinding SitesChromatin ImmunoprecipitationE1A-Associated p300 ProteinEnhancer Elements, GeneticHistonesMicePPAR gammaPromoter Regions, GeneticProtein BindingRNA InterferenceRNA, Small InterferingE1A-Associated p300 ProteinEp300 protein, mouseHistonesPPAR gammaRNA, Small Interfering3-isobutyl-1-methylxanthine; Rosiadipogenesischromatin immunoprecipitation; GRCNSconserved non-coding sequence; TZDsdexamethasone; IBMXenhancerglucocorticoid receptor; PPREH3 K27 acetylationlysine acetyl-transferase; DEXp300PPARg2PPAR-Response Elements; TSSrosiglitazone; ChIPthiazolidinediones; KATtranscription start site

Identifiers

PMID25485585
PMCPMC4614625
OpenAlexW1976159894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.