Evidence map›Paper›PMID 25485077›Full record

ArticleInterface focus2014

A phenomenological density-scaling approach to lamellipodial actin dynamics(†).

Alexandre Lewalle, Marco Fritzsche, Kerry Wilson, Richard Thorogate, Tom Duke, Guillaume Charras

Abstract read
In one paragraph

Article in Interface focus, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Actin Turnover in Lamellipodial Fragments.Current biology : CB · 2017
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alexandre LewalleLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK.
Marco FritzscheLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK.
Kerry WilsonLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK.
Richard ThorogateLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK.
Tom DukeLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK.
Guillaume CharrasLondon Centre for Nanotechnology , University College London , 17-19 Gordon Street, London WC1H 0AH , UK ; Department of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK ; Institute for the Physics of Living Systems, University College London, Gower Street, London WC1E 6BT, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/F021402/1
6 · The paper itself

Abstract

The integration of protein function studied in vitro in a dynamic system like the cell lamellipodium remains a significant challenge. One reason is the apparent contradictory effect that perturbations of some proteins can have on the overall lamellipodium dynamics, depending on exact conditions. Theoretical modelling offers one approach for understanding the balance between the mechanisms that drive and regulate actin network growth and decay. Most models use a 'bottom-up' approach, involving explicitly assembling biochemical components to simulate observable behaviour. Their correctness therefore relies on both the accurate characterization of all the components and the completeness of the relevant processes involved. To avoid potential pitfalls due to this uncertainty, we used an alternative 'top-down' approach, in which measurable features of lamellipodium behaviour, here observed in two different cell types (HL60 and B16-F1), directly inform the development of a simple phenomenological model of lamellipodium dynamics. We show that the kinetics of F-actin association and dissociation scales with the local F-actin density, with no explicit location dependence. This justifies the use of a simplified kinetic model of lamellipodium dynamics that yields predictions testable by pharmacological or genetic intervention. A length-scale parameter (the lamellipodium width) emerges from this analysis as an experimentally accessible probe of network regulatory processes.

Indexed as

actin dynamicsactin networklamellipodiumphotoactivation

Identifiers

PMID25485077
PMCPMC4213442

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.