ArticleInternational journal of wavelets, multiresolution and information processing2012
Wavelet Analysis of Protein Motion.
Article in International journal of wavelets, multiresolution and information processing, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Reversible extended secret image sharing with ability to correct errors based on Chinese remainder theorem.Heliyon · 2023Article
- Wordom update 2: A user-friendly program for the analysis of molecular structures and conformational ensembles.Computational and structural biotechnology journal · 2023Article
- Self-assembly Processes in Hydrated Montmorillonite by FTIR Investigations.Materials (Basel, Switzerland) · 2020Article
- MRI and PET image fusion using fuzzy logic and image local features.TheScientificWorldJournal · 2014Article
- Improving image quality in medical images using a combined method of undecimated wavelet transform and wavelet coefficient mapping.International journal of biomedical imaging · 2013Article
- A comparison of multiscale methods for the analysis of molecular dynamics simulations.The journal of physical chemistry. B · 2012Article
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Authors and funding
2 authors.
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Abstract
As high-throughput molecular dynamics simulations of proteins become more common and the databases housing the results become larger and more prevalent, more sophisticated methods to quickly and accurately mine large numbers of trajectories for relevant information will have to be developed. One such method, which is only recently gaining popularity in molecular biology, is the continuous wavelet transform, which is especially well-suited for time course data such as molecular dynamics simulations. We describe techniques for the calculation and analysis of wavelet transforms of molecular dynamics trajectories in detail and present examples of how these techniques can be useful in data mining. We demonstrate that wavelets are sensitive to structural rearrangements in proteins and that they can be used to quickly detect physically relevant events. Finally, as an example of the use of this approach, we show how wavelet data mining has led to a novel hypothesis related to the mechanism of the protein
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Registered trials
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