Evidence map›Paper›PMID 25484231›Full record

ArticleActa crystallographica. Section F, Structural biology communications2014

A simple technique to reduce evaporation of crystallization droplets by using plate lids with apertures for adding liquids.

Lauren E Zipper, Xavier Aristide, Dylan P Bishop, Ishita Joshi, Julia Kharzeev, Krishna B Patel, Brianna M Santiago, Karan Joshi, Kahille Dorsinvil, Robert M Sweet and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Using sound pulses to solve the crystal-harvesting bottleneck.Acta crystallographica. Section D, Structural biology · 2018
    Article
  3. Article
  4. Gentle, fast and effective crystal soaking by acoustic dispensing.Acta crystallographica. Section D, Structural biology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Lauren E ZipperOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Xavier AristideOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Dylan P BishopOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Ishita JoshiOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Julia KharzeevOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Krishna B PatelOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Brianna M SantiagoOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Karan JoshiOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Kahille DorsinvilOffice of Educational Programs, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Robert M SweetPhoton Sciences Directorate, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Alexei S SoaresPhoton Sciences Directorate, Brookhaven National Laboratory, Upton, NY 11973-5000, USA.
Brookhaven National Laboratory · USOffice of Education · US

Funding

X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MARIUZZA, ROY A · 1998 to 2011
$32.2M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Macromolecular Crystallography at the National Synchrotron Light SourceP41GM103473 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI SWEET, ROBERT M · 2012 to 2013
$4.9M
NCRR NIH HHS P41 RR012408NCRR NIH HHS P41RR012408NIGMS NIH HHS P41 GM103473NIGMS NIH HHS P41 GM111244
6 · The paper itself

Abstract

A method is described for using plate lids to reduce evaporation in low-volume vapor-diffusion crystallization experiments. The plate lids contain apertures through which the protein and precipitants were added to different crystallization microplates (the reservoir was filled before fitting the lids). Plate lids were designed for each of these commonly used crystallization microplates. This system minimizes the dehydration of crystallization droplets containing just a few nanolitres of protein and precipitant, and results in more reproducible diffraction from the crystals. For each lid design, changes in the weight of the plates were used to deduce the rate of evaporation under different conditions of temperature, air movement, droplet size and precipitant. For comparison, the state of dehydration was also visually assessed throughout the experiment. Finally, X-ray diffraction methods were used to compare the diffraction of protein crystals that were conventionally prepared against those that were prepared on plates with plate lids. The measurements revealed that the plate lids reduced the rate of evaporation by 63-82%. Crystals grown in 5 nl drops that were set up with plate lids diffracted to higher resolution than similar crystals from drops that were set up without plate lids. The results demonstrate that plate lids can be instrumental for improving few-nanolitre crystallizations.

Indexed as

CrystallizationCrystallography, X-RayProteinsProteinsacoustic droplet ejectioncrystallizationdehydrationhigh-throughput screeningin situ X-ray data collectionvapor diffusion

Identifiers

PMID25484231
PMCPMC4259245
OpenAlexW2097626126

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.