Evidence map›Paper›PMID 25484187›Full record

ReviewNucleus (Austin, Tex.)2014

Implications of polyadenylation in health and disease.

Ana Curinha, Sandra Oliveira Braz, Isabel Pereira-Castro, Andrea Cruz, Alexandra Moreira

Open access · goldAbstract readReview
In one paragraph

Review in Nucleus (Austin, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 138 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The role of untranslated region variants in Mendelian disease: a review.European journal of human genetics : EJHG · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Single-Molecule Poly(A) Tail Sequencing (SM-PATseq) Using the PacBio Platform.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  12. Posttranscriptional Regulation by Proteins and Noncoding RNAs.Advances in experimental medicine and biology · 2024
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. A pilot study on identifying gene signatures as markers for predicting patient response to antiseizure medications.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2023
    Article
  18. Article
  19. Review
  20. Neoantigens: promising targets for cancer therapy.Signal transduction and targeted therapy · 2023
    Review

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Ana Curinhaa Gene Regulation Group; IBMC-Instituto de Biologia Molecular e Celular ; Universidade do Porto ; Porto , Portugal.
Sandra Oliveira Braz
Isabel Pereira-Castro
Andrea Cruz
Alexandra Moreira
Universidade do Porto · PTGene Therapy Laboratory · FRInstituto de Biologia Molecular e CelularUniversity of Aveiro · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyadenylation is the RNA processing step that completes the maturation of nearly all eukaryotic mRNAs. It is a two-step nuclear process that involves an endonucleolytic cleavage of the pre-mRNA at the 3'-end and the polymerization of a polyadenosine (polyA) tail, which is fundamental for mRNA stability, nuclear export and efficient translation during development. The core molecular machinery responsible for the definition of a polyA site includes several recognition, cleavage and polyadenylation factors that identify and act on a given polyA signal present in a pre-mRNA, usually an AAUAAA hexamer or similar sequence. This mechanism is tightly regulated by other cis-acting elements and trans-acting factors, and its misregulation can cause inefficient gene expression and may ultimately lead to disease. The majority of genes generate multiple mRNAs as a result of alternative polyadenylation in the 3'-untranslated region. The variable lengths of the 3' untranslated regions created by alternative polyadenylation are a recognizable target for differential regulation and clearly affect the fate of the transcript, ultimately modulating the expression of the gene. Over the past few years, several studies have highlighted the importance of polyadenylation and alternative polyadenylation in gene expression and their impact in a variety of physiological conditions, as well as in several illnesses. Abnormalities in the 3'-end processing mechanisms thus represent a common feature among many oncological, immunological, neurological and hematological disorders, but slight imbalances can lead to the natural establishment of a specific cellular state. This review addresses the key steps of polyadenylation and alternative polyadenylation in different cellular conditions and diseases focusing on the molecular effectors that ensure a faultless pre-mRNA 3' end formation.

Indexed as

3' Untranslated RegionsGene Expression Regulation, DevelopmentalGenetic Diseases, InbornHumansPoly APolyadenylationRNA, MessengerRNA Stability3' Untranslated RegionsPoly ARNA, Messenger3′READS, 3′ Region Extraction and Deep Sequencing3′ untranslated regionAD, Alzheimer diseasealternative polyadenylationAPA, Alternative polyadenylationAREs, Au-rich elementsaSynL, longest aSyn isoformaSyn, α-SynucleinBPV, bovine papilloma virusCAH, congenital adrenal hyperplasiacell stateCFIm25, Cleavage Factor Im 25 kDaCOX-2, cyclooxygenase 2CPSF, Cleavage and Polyadenylation Specificity FactorCSTF2, cleavage stimulatory factor-64kDadiseaseDMKN, dermokineDSE, downstream sequence elementESC, embryonic stem cellsFMR1, Fragil X mental retardation 1FOXP3, forkhead box P3FXPOI, fragile X-associated immature ovarian insufficiencyFXS, Fragile X syndromeFXTAS, fragile X-associated tremor/ataxia syndromegene expressionHGRG-14, high-glucose-regulated geneIMP-1, Insulin-like growth factor 2 mRNA binding protein 1IPEX, immune dysfunction, polyendocrinopathy, enteropathy, X-linkedLPS, lipopolysaccharidemiRNA, microRNAnuclear 1OPMD, oculopharyngeal muscular dystrophyPABPN1, poly(A) binding proteinPAP, polyA polymerasepA signal, polyA signalPAS, polyA sitepA tail, polyA tailPD, Parkinson diseasePDXK, pyridoxal kinasepolyadenylationPPIE, peptidylpropylisomerase ERBP, RNA-binding proteinRNA Pol II, RNA polymerase IIsiRNAs, small interfering RNAsSLE, systemic lupus erythematosusSMA, Spinal Muscular AtrophySMN, Survival Motor NeuronSNP, single nucleotide polymorphismsnRNPs, spliceosomal small nuclear ribonucleoproteinsStAR, steroigogenic acute regulatoryTCF7L2, transcription factor 7-like 2TCF/LEF, T cell factor/lymphoid enhancer factor.TCR, T cell receptorTLI, tandem UTR length indexTNF-α, tumor necrosis factor-αUSE, upstream sequence elementUTR, untranslated regionWASP, Wiskott-Aldrich syndrome proteinWAS, Wiskott-Aldrich syndromeα-GalA, α-galactosidase Aμ, IgM heavy-chain mRNA

Identifiers

PMID25484187
PMCPMC4615197
OpenAlexW2165518330

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.