Evidence map›Paper›PMID 25484186›Full record

ArticleNucleus (Austin, Tex.)2014

A novel cell permeable DNA replication and repair marker.

Henry D Herce, Malini Rajan, Gisela Lättig-Tünnemann, Marion Fillies, M Cristina Cardoso

Open access · goldAbstract read
In one paragraph

Article in Nucleus (Austin, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  9. Primary cilia found on HeLa and other cancer cells.Cell biology international · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Henry D Hercea Department of Biology , Technische Universität Darmstadt ; Darmstadt , Germany.
Malini Rajan
Gisela Lättig-Tünnemann
Marion Fillies
M Cristina Cardoso
Technical University of Darmstadt · DECharité - Universitätsmedizin Berlin · DE

Funding

Simulation studies of the mechanism of translocation of cell penetrating peptidesR01GM086801 · NIGMS · RENSSELAER POLYTECHNIC INSTITUTE · PI GARCIA, ANGEL E · 2010 to 2013
$1.2M
NIGMS NIH HHS R01-GM086801
6 · The paper itself

Abstract

Proliferating Cell Nuclear Antigen (PCNA) is a key protein in DNA replication and repair. The dynamics of replication and repair in live cells is usually studied introducing translational fusions of PCNA. To obviate the need for transfection and bypass the problem of difficult to transfect and/or short lived cells, we have now developed a cell permeable replication and/or repair marker. The design of this marker has three essential molecular components: (1) an optimized artificial PCNA binding peptide; (2) a cell-penetrating peptide, derived from the HIV-1 Trans Activator of Transcription (TAT); (3) an in vivo cleavable linker, linking the two peptides. The resulting construct was taken up by human, hamster and mouse cells within minutes of addition to the media. Inside the cells, the cargo separated from the vector peptide and bound PCNA effectively. Both replication and repair sites could be directly labeled in live cells making it the first in vivo cell permeable peptide marker for these two fundamental cellular processes. Concurrently, we also introduced a quick peptide based PCNA staining method as an alternative to PCNA antibodies for immunofluorescence applications. In summary, we present here a versatile tool to instantaneously label repair and replication processes in fixed and live cells.

Indexed as

3T3 CellsAnimalsCell CycleCell-Penetrating PeptidesCricetinaeDNA RepairDNA ReplicationHeLa CellsHIV-1HumansMiceProliferating Cell Nuclear AntigenProtein BindingProtein Conformationtat Gene Products, Human Immunodeficiency VirusCell-Penetrating PeptidesProliferating Cell Nuclear Antigentat Gene Products, Human Immunodeficiency Viruscell cyclecell-penetrating peptidesDNA repairDNA replicationPCNAproliferating cell nuclear antigen

Identifiers

PMID25484186
PMCPMC4615156
OpenAlexW2045574898

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.