Evidence map›Paper›PMID 25484023›Full record

Trial reportEpigenetics2014

Epigenome-wide analysis of neonatal CD4(+) T-cell DNA methylation sites potentially affected by maternal fish oil supplementation.

Manori Amarasekera, Paul Noakes, Deborah Strickland, Richard Saffery, David J Martino, Susan L Prescott

Open access · bronzeAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Omega-3 fatty acid addition during pregnancy.The Cochrane database of systematic reviews · 2018
    Pooled it
  2. Maternal fatty acid concentrations and newborn DNA methylation.The American journal of clinical nutrition · 2020
    Trial
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  11. Review
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  15. Article
  16. Review
  17. Allele-specific methylation in theClinical epigenetics · 2018
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Manori Amarasekeraa School of Pediatrics and Child Health ; University of Western Australia ; Perth , Australia.
Paul Noakes
Deborah Strickland
Richard Saffery
David J Martino
Susan L Prescott
University of Western Australia · AUMurdoch Children's Research Institute · AUThe Kids Research Institute Australia · AUUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Supplementation of fish oil rich in omega-3 polyunsaturated fatty acids (n-3 PUFA) during pregnancy has been shown to confer favorable health outcomes in the offspring. In a randomized controlled trial, we have previously shown that n-3 PUFA supplementation in pregnancy was associated with modified immune responses and some markers of immune maturation. However, the molecular mechanisms underlying these heritable effects are unclear. To determine whether the biological effects of maternal n-3 PUFA supplementation are mediated through DNA methylation, we analyzed CD4(+) T-cells purified from cryo-banked cord blood samples from a previously conducted clinical trial. Of the 80 mother-infant pairs that completed the initial trial, cord blood samples of 70 neonates were available for genome-wide DNA methylation profiling. Comparison of purified total CD4(+) T-cell DNA methylation profiles between the supplement and control groups did not reveal any statistically significant differences in CpG methylation, at the single-CpG or regional level. Effect sizes among top-ranked probes were lower than 5% and did not warrant further validation. Tests for association between methylation levels and key n-3 PUFA parameters, docosahexaenoic acid (DHA), eicosapentaenoic acid (EPA), or total n-3 PUFAs were suggestive of dose-dependent effects, but these did not reach genome-wide significance. Our analysis of the microarray data did not suggest strong modifying effects of in utero n-3 PUFA exposure on CD4(+) T-cell methylation profiles, and no probes on the array met our criteria for further validation. Other epigenetic mechanisms may be more relevant mediators of functional effects induced by n-3 PUFA in early life.

Indexed as

AdultCD4-Positive T-LymphocytesCpG IslandsDietary SupplementsDNA MethylationEpigenesis, GeneticErythrocytesFatty AcidsFatty Acids, Omega-3FemaleFetal BloodFish OilsGenome-Wide Association StudyHumansInfant, NewbornMaleFatty AcidsFatty Acids, Omega-3Fish OilsCBMC, cord blood mononuclear cells.CD4+ T-cellscord bloodDHADHA, docosahexaenoic acidDNA methylationEPAEPA, eicosapentaenoic acidFish oilmaternal supplementationn-3, omega 3neonatesomega-3 fatty acidsPUFA, polyunsaturated fatty acids

Identifiers

PMID25484023
PMCPMC4622663
OpenAlexW2070896966

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.