Evidence map›Paper›PMID 25483335›Full record

ReviewGut microbes2015

Future perspectives, applications and challenges of genomic epidemiology studies for food-borne pathogens: A case study of Enterohemorrhagic Escherichia coli (EHEC) of the O157:H7 serotype.

Mark Eppinger, Thomas A Cebula

Abstract readReview
In one paragraph

Review in Gut microbes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Shiga Toxin-ProducingMicroorganisms · 2025
    Review
  3. Article
  4. Article
  5. Frontiers in microbiology · 2023
    Article
  6. Genome Sequence Analysis and Characterization of Shiga Toxin 2 Production byFrontiers in cellular and infection microbiology · 2022
    Article
  7. Review
  8. Pathogenomes of Atypical Non-shigatoxigenicFrontiers in microbiology · 2020
    Article
  9. Gut Microbiota and Colonization Resistance against Bacterial Enteric Infection.Microbiology and molecular biology reviews : MMBR · 2019
    Review
  10. Anti-biofilm and Antibacterial Activity ofIndian journal of microbiology · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Mark Eppingera Department of Biology; The University of Texas at San Antonio ; San Antonio , TX , USA.
Thomas A Cebula

Funding

Phylogenomic framework for virulence studies of Escherichia coli O157:H7SC2AI120941 · NIAID · UNIVERSITY OF TEXAS SAN ANTONIO · PI EPPINGER, MARK · 2015 to 2017
$441k
NIAID NIH HHS SC2 AI120941
6 · The paper itself

Abstract

The shiga-toxin (Stx)-producing human pathogen Escherichia coli serotype O157:H7 is a highly pathogenic subgroup of Stx-producing E. coli (STEC) with food-borne etiology and bovine reservoir. Each year in the U. S., approximately 100,000 patients are infected with enterohemorrhagic E. coli (EHEC) of the O157:H7 serotype. This food-borne pathogen is a global public health threat responsible for widespread outbreaks of human disease. Since its initial discovery in 1982, O157:H7 has rapidly become the dominant EHEC serotype in North America. Hospitalization rates among patients as high as 50% have been reported for severe outbreaks of human disease. Symptoms of disease can rapidly deteriorate and progress to life-threatening complications such as Hemolytic Uremic Syndrome (HUS), the leading cause of kidney failure in children, or Hemorrhagic Colitis. In depth understanding of the genomic diversity that exists among currently circulating EHEC populations has broad applications for improved molecular-guided biosurveillance, outbreak preparedness, diagnostic risk assessment, and development of alternative toxin-suppressing therapeutics.

Indexed as

Disease OutbreaksMolecular TypingAnimalsEscherichia coli InfectionsEscherichia coli O157Foodborne DiseasesHospitalizationHumansIncidenceMolecular EpidemiologyUnited Statesenterohemorrhagic Escherichia coli (EHEC)food borne pathogensgenomic epidemiologygenotypingoutbreaks

Identifiers

PMID25483335
PMCPMC4615391

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.