Evidence map›Paper›PMID 25483089›Full record

ArticleCell cycle (Georgetown, Tex.)2014

Expression of the p12 subunit of human DNA polymerase δ (Pol δ), CDK inhibitor p21(WAF1), Cdt1, cyclin A, PCNA and Ki-67 in relation to DNA replication in individual cells.

Hong Zhao, Sufang Zhang, Dazhong Xu, Marietta Ywt Lee, Zhongtao Zhang, Ernest Yc Lee, Zbigniew Darzynkiewicz

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hong Zhaoa Brander Cancer Research Institute; Department of Pathology; New York Medical College ; Valhalla , NY USA.
Sufang Zhang
Dazhong Xu
Marietta Ywt Lee
Zhongtao Zhang
Ernest Yc Lee
Zbigniew Darzynkiewicz
New York Medical College · US

Funding

BIOCHEMICAL STUDIES OF POLYMERASE DELTAR01GM031973 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LEE, MARIETTA Y. · 1985 to 2012
$5.8M
Modification of DNA Polymerase Delta by a Novel Mechanism During Replication StreR01ES014737 · NIEHS · NEW YORK MEDICAL COLLEGE · PI LEE, MARIETTA Y., ZHANG, ZHONGTAO · 2008 to 2017
$3.5M
NIEHS NIH HHS ES14737NIGMS NIH HHS GM31973PHS HHS NCI R0128 704
6 · The paper itself

Abstract

We recently reported that the p12 subunit of human DNA polymerase δ (Pol δ4) is degraded by CRL4(Cdt2) which regulates the licensing factor Cdt1 and p21(WAF1) during the G1 to S transition. Presently, we performed multiparameter laser scanning cytometric analyses of changes in levels of p12, Cdt1 and p21(WAF1), detected immunocytochemically in individual cells, vis-à-vis the initiation and completion of DNA replication. The latter was assessed by pulse-labeling A549 cells with the DNA precursor ethynyl-2'-deoxyribose (EdU). The loss of p12 preceded the initiation of DNA replication and essentially all cells incorporating EdU were p12 negative. Completion of DNA replication and transition to G2 phase coincided with the re-appearance and rapid rise of p12 levels. Similar to p12 a decline of p21(WAF1) and Cdt1 was seen at the end of G1 phase and all DNA replicating cells were p21(WAF1) and Cdt1 negative. The loss of p21(WAF1) preceded that of Cdt1 and p12 and the disappearance of the latter coincided with the onset of DNA replication. Loss of p12 leads to conversion of Pol δ4 to its trimeric form, Pol δ3, so that the results provide strong support to the notion that Pol δ3 is engaged in DNA replication during unperturbed progression through the S phase of cell cycle. Also assessed was a correlation between EdU incorporation, likely reflecting the rate of DNA replication in individual cells, and the level of expression of positive biomarkers of replication cyclin A, PCNA and Ki-67 in these cells. Of interest was the observation of stronger correlation between EdU incorporation and expression of PCNA (r = 0.73) than expression of cyclin A (r = 0.47) or Ki-67 (r = 0.47).

Indexed as

Cell CycleCell Cycle ProteinsCyclin ACyclin-Dependent Kinase Inhibitor p21DNA Polymerase IIIDNA ReplicationG1 PhaseHeLa CellsHumansKi-67 AntigenProliferating Cell Nuclear AntigenRNA InterferenceS PhaseUbiquitinationCDKN1A protein, humanCDT1 protein, humanCell Cycle ProteinsCyclin ACyclin-Dependent Kinase Inhibitor p21DNA Polymerase IIIKi-67 AntigenPOLD4 protein, humanProliferating Cell Nuclear AntigenCdk, cyclin-dependent kinaseCDK inhibitor p21WAF1, imaging cytometryCdt1Cdt1, Cdc10-dependent transcript 1Cdt2, Cdc10-dependent transcript 2cell cyclecell proliferationCRL4Cdt2CRL, cullin-ring ligaseDNA replicationEdU labelinglaser scanning cytometryp12p21PCNA, proliferating cell nuclear antigenpolymerase δPol δ, DNA polymerase δS-phase

Identifiers

PMID25483089
PMCPMC4614631
OpenAlexW1970290986

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.