Evidence map›Paper›PMID 25482793›Full record

ArticlePlant signaling & behavior2014

The acclimation response to high light is initiated within seconds as indicated by upregulation of AP2/ERF transcription factor network in Arabidopsis thaliana.

M Moore, Mo Vogel, Kj Dietz

Abstract read
In one paragraph

Article in Plant signaling & behavior, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. HeterologousInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

M Moorea Biochemistry and Physiology of Plants ; Bielefeld University ; Bielefeld , Germany.
Mo Vogel
Kj Dietz

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High light acclimation implicates mechanisms on various molecular levels and time scales. The recently identified small transcription factor network of APETALA 2/ETHYLENE RESPONSE FACTOR (AP2/ERF) transcription factors is triggered upon transfer of Arabidopsis to high light and depends on metabolite export and mitogen activated protein kinase activation. An experimental design was developed consisting of a low light to high light and back to low light illumination. This allowed the determination of the time point of no return post high light transfer which activates transcription of the AP2/ERF network. Within 10 seconds of high light treatment transcript levels of ERF6, ERF104, ERF105 and RRTF were triggered to increase from low to high levels within the next 10 minutes witnessing an ultrafast retrograde pathway with a very early time point of no return. This response differed profoundly from other high light-responsive transcripts such as stromal ascorbate peroxidase (sAPX) which accumulated in a dose-dependent manner or COR47.

Indexed as

LightAcclimatizationArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGene Regulatory NetworksHomeodomain ProteinsLight Signal TransductionModels, BiologicalNuclear ProteinsRNA, MessengerTime FactorsTranscription FactorsUp-RegulationAPETALA2 protein, ArabidopsisArabidopsis ProteinsHomeodomain ProteinsNuclear ProteinsRNA, MessengerTranscription FactorsABA, Abscisic AcidacclimationAP2/ERF, APETALA2/ETHYLENE RESPONSE FACTORA. thaliana, Arabidopsis thalianachloroplastETC, electron transport chainH-light, High Light (800 μmol quanta m−2 s−1)LH→L, Low Light to High Light to Low Light transferlightL-light, Low Light (8 μmol quanta m−2 s−1)log2, logarithmic fold change to base 2Low Light to High Light transferphotosynthesisROS, reactive oxygen speciesSA, Salicylic AcidTF, Transcription Factor; L→Htranscription factorWWC, water-water cycle

Identifiers

PMID25482793
PMCPMC4622746

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.