Evidence map›Paper›PMID 25482055›Full record

ReviewEpigenetics2014

Chromatin regulation: how complex does it get?

Karin Meier, Alexander Brehm

Open access · bronzeAbstract readReview
In one paragraph

Review in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 114 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. MBTD1 preserves adult hematopoietic stem cell pool size and function.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

Karin Meiera Institut für Molekularbiologie und Tumorforschung ; Philipps-Universität Marburg ; Marburg , Germany.
Alexander Brehm
Philipps University of Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene transcription is tightly regulated at different levels to ensure that the transcriptome of the cell is appropriate for developmental stage and cell type. The chromatin state in which a gene is embedded determines its expression level to a large extent. Activation or repression of transcription is typically accomplished by the recruitment of chromatin-associated multisubunit protein complexes that combine several molecular tools, such as histone-binding and chromatin-modifying activities. Recent biochemical purifications of such complexes have revealed a substantial diversity. On the one hand, complexes that were thought to be unique have been revealed to be part of large complex families. On the other hand, protein subunits that were thought to only exist in separate complexes have been shown to coexist in novel assemblies. In this review we discuss our current knowledge of repressor complexes that contain MBT domain proteins and/or the CoREST co-repressor and use them as a paradigm to illustrate the unexpected heterogeneity and tool sharing of chromatin regulating protein complexes. These recent insights also challenge the ways we define and think about protein complexes in general.

Indexed as

AnimalsChromatinCo-Repressor ProteinsDNA-Binding ProteinsDrosophila ProteinsEvolution, MolecularHumansMultiprotein ComplexesNerve Tissue ProteinsProtein Structure, TertiaryChromatinCo-Repressor ProteinsDNA-Binding ProteinsDrosophila ProteinsL3MBTL3 protein, humanMultiprotein ComplexesNerve Tissue ProteinsRCOR1 protein, humanATP, adenosine triphosphateBAP, brahma associated proteinBHC80, BRAF-histone deacetylase complex 80BRG1, brahma Related Gene 1CHD, chromo domain helicase DNA bindingcomplex familyCoRESTCoREST REST, corepressordL(3)mbt, Drosophila Lethal 3 malignant brain tumorDNA, deoxyribonucleic acidDNMT, DNA methyltransferaseDP-1, dimerization partner 1E2F, E2 transcription FactorELM2, EGL-27 and MTA1 homology 2ES cell, embryonic stem cellshBRM, human BrahmaHDAC, histone deacetylasH, histoneHMTase, histone methylaseHP1, heterochromatin protein 1K, lysinel(3)mbt, lethal 3 malignant brain tumorL3MBTL, lethal 3 malignant brain tumor-likeLint-1, l(3)mbt interacting 1LINT, l(3)mbt interactingLSD1, lysine-specific demethylase 1MBT, malignant brain tumorMBT proteinMBTS, malignant brain tumor signatureNPA1, nucleosome assembly proteinNRSF, neural-restrictive silencing factorNuRD, nucleosome remodeling and deacetylasePBAP, polybromo-associated BAPPcG, polycomb groupPc, polycombPHD, plant homeo domainPho, pleiohomeoticPhoRC, Pho repressive complexPh, polyhomeoticPRC1, polycomb repressive complex 1PRE, polycomb responsive elementprotein complexPsc, posterior sex combsRB, retinoblastomaREST, repressor element 1 silencing transcription factorRNA, ribonucleic acidRpd3, reduced potassium dependency 3SANT, SWI/ADA2/N-CoR/TFIIIBSce, sex combs extraSCML, sex combs on midleg-likeScm, sex combs on midlegSfmbt, Scm-related gene containing 4 mbt domainsSLC, SFMBT1, LSD1, CoRESTSWH, Salvador-Warts-HippoSWI/SNF, switching defective/sucrose non-fermentingtranscriptional regulationTSS, transcription start siteYY1, ying-yang 1ZNF, zinc finger

Identifiers

PMID25482055
PMCPMC4622878
OpenAlexW1974330670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.