Evidence map›Paper›PMID 25480034›Full record

ArticleAmerican journal of human genetics2014

Genetic association analysis under complex survey sampling: the Hispanic Community Health Study/Study of Latinos.

Dan-Yu Lin, Ran Tao, William D Kalsbeek, Donglin Zeng, Franklyn Gonzalez, Lindsay Fernández-Rhodes, Mariaelisa Graff, Gary G Koch, Kari E North, Gerardo Heiss

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed, 7 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 7 syntheses or guidelines pooled it, 99 citations in OpenAlex.

  1. Pooled it
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  8. Article
  9. Type 2 diabetes genetics in 125,000 admixed adults from Mexico City.medRxiv : the preprint server for health sciences · 2026
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  20. A Guide to Genome-Wide Association Study Design for Diabetic Retinopathy.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Dan-Yu LinDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA. Electronic address: lin@bios.unc.edu.
Ran TaoDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA.
William D KalsbeekDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA.
Donglin ZengDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA.
Franklyn GonzalezDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA.
Lindsay Fernández-RhodesDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC 27599-8050, USA.
Mariaelisa GraffDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC 27599-8050, USA.
Gary G KochDepartment of Biostatistics, University of North Carolina, Chapel Hill, NC 27599-7420, USA.
Kari E NorthDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC 27599-8050, USA.
Gerardo HeissDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC 27599-8050, USA.
University of North Carolina at Chapel Hill · US

Funding

Statistical Methods for Cancer Clinical TrialsP01CA142538 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIN, DANYU · 2010 to 2019
$21.3M
OTHER FUNCTIONS - R&D - HISPANIC COMMUNITY HEALTH STUDYN01HC65233 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CAI, JAIWEN · 2007 to 2012
$15.1M
HISPANIC COMMUNITY HEALTH STUDY - FIELD CENTERN01HC65237 · NHLBI · SAN DIEGO STATE UNIVERSITY · PI TALAVERA, GREGORY · 2007 to 2013
$12.4M
Cardiovascular Epidemiology Training GrantT32HL007055 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Wayne D. Rosamond · 1986 to 2026
$10.0M
Genetic Epidemiology of Causal Variants Across the Life CourseU01HG004803 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NORTH, KARI E. · 2008 to 2012
$9.0M
Genetic Epidemiology of Causal Variants across the Life Course Phase II (CALiCo IU01HG007416 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NORTH, KARI E. · 2013 to 2017
$3.9M
STATISTICAL METHODS IN CURRENT CANCER RESEARCHR01CA082659 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIN, DANYU · 2000 to 2016
$3.7M
Semiparametric Regression Analysis of Censored DataR37GM047845 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIN, DANYU · 2005 to 2014
$3.3M
Thalassemia Clinical Research Network, CanadaU01HL065233 · NHLBI · UNIVERSITY HEALTH NETWORK · PI OLIVIERI, NANCY F · 2000 to 2009
$2.6M
GENETIC ARCHITECTURE OF PLASMA T-PA AND PAI-1R01HL065234 · NHLBI · VANDERBILT UNIVERSITY · PI MOORE, JASON H. · 2000 to 2004
$1.7M
HISPANIC COMMUNITY HEALTH STUDY-268065233N01HC065233 · HC · COORDINATING CENTER · PI CHAMBLESS, LLOYD E · 2006 to 2006
–
NCI NIH HHS P01 CA142538NCI NIH HHS R01 CA082659NCI NIH HHS R01CA082659NHGRI NIH HHS U01 HG004803NHGRI NIH HHS U01HG004803NHGRI NIH HHS U01 HG007416NHLBI NIH HHS N01 HC065233NHLBI NIH HHS N01 HC065234NHLBI NIH HHS N01 HC065235NHLBI NIH HHS N01 HC065236NHLBI NIH HHS N01 HC065237NHLBI NIH HHS N01 HC65233NHLBI NIH HHS N01-HC65234NHLBI NIH HHS N01-HC65235NHLBI NIH HHS N01-HC65236NHLBI NIH HHS N01 HC65237NHLBI NIH HHS T32 HL007055NIGMS NIH HHS R37 GM047845NIGMS NIH HHS R37GM047845
6 · The paper itself

Abstract

The cohort design allows investigators to explore the genetic basis of a variety of diseases and traits in a single study while avoiding major weaknesses of the case-control design. Most cohort studies employ multistage cluster sampling with unequal probabilities to conveniently select participants with desired characteristics, and participants from different clusters might be genetically related. Analysis that ignores the complex sampling design can yield biased estimation of the genetic association and inflation of the type I error. Herein, we develop weighted estimators that reflect unequal selection probabilities and differential nonresponse rates, and we derive variance estimators that properly account for the sampling design and the potential relatedness of participants in different sampling units. We compare, both analytically and numerically, the performance of the proposed weighted estimators with unweighted estimators that disregard the sampling design. We demonstrate the usefulness of the proposed methods through analysis of MetaboChip data in the Hispanic Community Health Study/Study of Latinos, which is the largest health study of the Hispanic/Latino population in the United States aimed at identifying risk factors for various diseases and determining the role of genes and environment in the occurrence of diseases. We provide guidelines on the use of weighted and unweighted estimators, as well as the relevant software.

Indexed as

Health SurveysModels, StatisticalAdolescentAdultAgedCohort StudiesComputer SimulationFemaleGenetic Association StudiesGenotypeHispanic or LatinoHumansMaleMiddle AgedPhenotypeResearch Design

Identifiers

PMID25480034
PMCPMC4259979
OpenAlexW2032770346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.