Evidence map›Paper›PMID 25479762›Full record

ArticleBMC biotechnology2014

Detection of distinct glycosylation patterns on human γ-glutamyl transpeptidase 1 using antibody-lectin sandwich array (ALSA) technology.

Matthew B West, Katie Partyka, Christa L Feasley, Kevin A Maupin, Indiwari Goppallawa, Christopher M West, Brian B Haab, Marie H Hanigan

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in BMC biotechnology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Matthew B West
Katie Partyka
Christa L Feasley
Kevin A Maupin
Indiwari Goppallawa
Christopher M West
Brian B Haab
Marie H Hanigan
Van Andel Institute · USUniversity of Oklahoma Health Sciences Center · USCivil Aerospace Medical Institute · US

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
Structure-Function Studies of MsvR, a Methanogen-Specific Transcriptional RegulaP20GM103640 · NIGMS · UNIVERSITY OF OKLAHOMA · PI ROWE, ASHLEE HEDGECOCK · 2012 to 2021
$20.4M
Detection of Pre-Invasive Pancreatic Cysts Using Protein and Glycan BiomarkersU01CA152653 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI ALLEN, PETER J, BRAND, RANDALL · 2010 to 2021
$5.8M
SIGNIFICANCE OF GGT EXPRESSION IN TUMORSR01CA057530 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HANIGAN, MARIE H · 1992 to 2008
$1.9M
Significance of GGT Expression in TumorsR56CA057530 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HANIGAN, MARIE H · 2009 to 2009
$238k
Tissue and Tumor Specific Glycosylation of ProteinsF32CA128338 · NCI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI WEST, MATTHEW · 2007 to 2009
$148k
NCI NIH HHS 1U01CA152653NCI NIH HHS F32 CA128338NCI NIH HHS R01 CA057530NCI NIH HHS R01 CA57530NCI NIH HHS R56 CA057530NCI NIH HHS R56 CA57530NCI NIH HHS U01 CA152653NIGMS NIH HHS GM62116NIGMS NIH HHS P20 GM103640NIGMS NIH HHS P20GM103640NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

backgroundγ-Glutamyl transpeptidase 1 (GGT1) is an N-glycosylated membrane protein that catabolizes extracellular glutathione and other γ-glutamyl-containing substrates. In a variety of disease states, including tumor formation, the enzyme is shed from the surface of the cell and can be detected in serum. The structures of the N-glycans on human GGT1 (hGGT1) have been shown to be tissue-specific. Tumor-specific changes in the glycans have also been observed, suggesting that the N-glycans on hGGT1 would be an important biomarker for detecting tumors and monitoring their progression during treatment. However, the large quantities of purified protein required to fully characterize the carbohydrate content poses a significant challenge for biomarker development. Herein, we investigated a new antibody-lectin sandwich array (ALSA) platform to determine whether this microanalytical technique could be applied to the characterization of N-glycan content of hGGT1 in complex biological samples.

resultsOur data show that hGGT1 can be isolated from detergent extracted membrane proteins by binding to the ALSA platform. Probing hGGT1 with lectins enables characterization of the N-glycans. We probed hGGT1 from normal human liver tissue, normal human kidney tissue, and hGGT1 expressed in the yeast Pichia pastoris. The lectin binding patterns obtained with the ALSA platform are consistent with the hGGT1 N-glycan composition obtained from previous large-scale hGGT1 N-glycan characterizations from these sources. We also validate the implementation of the Microcystis aeruginosa lectin, microvirin, in this platform and provide refined evidence for its efficacy in specifically recognizing high-mannose-type N-glycans, a class of carbohydrate modification that is distinctive of hGGT1 expressed by many tumors.

conclusionUsing this microanalytical approach, we provide proof-of-concept for the implementation of ALSA in conducting high-throughput studies aimed at investigating disease-related changes in the glycosylation patterns on hGGT1 with the goal of enhancing clinical diagnoses and targeted treatment regimens.

Indexed as

Antibodiesgamma-GlutamyltransferaseGlycosylationHumansKidneyLectinsLiverProtein Array AnalysisProtein BindingAntibodiesgamma-GlutamyltransferaseLectins

Identifiers

PMID25479762
PMCPMC4297448
OpenAlexW1985710362

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.