Evidence map›Paper›PMID 25479055›Full record

ArticlePloS one2014

Extended ultrastructural characterization of chordoma cells: the link to new therapeutic options.

Dagmar Kolb, Elisabeth Pritz, Bibiane Steinecker-Frohnwieser, Birgit Lohberger, Alexander Deutsch, Thomas Kroneis, Amin El-Heliebi, Gottfried Dohr, Katharina Meditz, Karin Wagner and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Pediatric Chordoma: A Tale of Two Genomes.Molecular cancer research : MCR · 2024
    Article
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Dagmar KolbCenter for Medical Research, Medical University of Graz, Graz, Austria; Institute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Elisabeth PritzInstitute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Bibiane Steinecker-FrohnwieserLudwig Boltzmann Institute for Rehabilitation of Internal Diseases, Ludwig Boltzmann Cluster for Rheumatology, Balneology and Rehabilitation, Saalfelden, Austria.
Birgit LohbergerDepartment of Orthopaedic Surgery, Medical University of Graz, Graz, Austria.
Alexander DeutschDivision of Hematology, Department of Internal Medicine, Medical University of Graz, Graz, Austria.
Thomas KroneisInstitute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Amin El-HeliebiInstitute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Gottfried DohrInstitute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Katharina MeditzCenter for Medical Research, Medical University of Graz, Graz, Austria.
Karin WagnerCenter for Medical Research, Medical University of Graz, Graz, Austria.
Harald KoefelerCenter for Medical Research, Medical University of Graz, Graz, Austria.
Gerd LeitingerInstitute of Cell Biology, Histology & Embryology, Medical University of Graz, Graz, Austria.
Andreas LeithnerDepartment of Orthopaedic Surgery, Medical University of Graz, Graz, Austria.
Bernadette Liegl-AtzwangerInstitute of Pathology, Medical University of Graz, Graz, Austria.
Dagmar ZweytickBiophysics Division, Institute of Molecular Biosciences, University of Graz, Graz, Austria.
Beate RinnerCenter for Medical Research, Medical University of Graz, Graz, Austria.
Medical University of Graz · ATLudwig Boltzmann Institute for Digital Health and PreventionUniversity of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chordomas are rare bone tumors, developed from the notochord and largely resistant to chemotherapy. A special feature of this tumor is the heterogeneity of its cells. By combining high pressure freezing (HPF) with electron tomography we were able to illustrate the connections within the cells, the cell-cell interface, and the mitochondria-associated endoplasmic reticulum membrane complex that appears to play a special role among the characteristics of chordoma. These lipid raft-like regions are responsible for lipid syntheses and for calcium signaling. Compared to other tumor cells, chordoma cells show a close connection of rough endoplasmic reticulum and mitochondria, which may influence the sphingolipid metabolism and calcium release. We quantified levels of ceramide and glycosylceramide species by the methyl tert-butyl ether extraction method and we assessed the intracellular calcium concentration with the ratiometric fluorescent dye Fura-2AM. Measurements of the changes in the intracellular calcium concentration revealed an increase in calcium due to the application of acetylcholine. With regard to lipid synthesis, glucosylceramide levels in the chordoma cell line were significantly higher than those in normal healthy cells. The accumulation of glycosylceramide in drug resistant cancer cells has been confirmed in many types of cancer and may also account for drug resistance in chordoma. This study aimed to provide a deep morphological description of chordoma cells, it demonstrated that HPF analysis is useful in elucidating detailed structural information. Furthermore we demonstrate how an accumulation of glycosylceramide in chordoma provides links to drug resistance and opens up the field for new research options.

Indexed as

Bone NeoplasmsCell Line, TumorChordomaDrug Resistance, NeoplasmEndoplasmic Reticulum, RoughHumansMitochondriaNotochordSphingolipidsSphingolipids

Identifiers

PMID25479055
PMCPMC4257693
OpenAlexW2033179659

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.