Evidence map›Paper›PMID 25479044›Full record

ArticleExperimental eye research2015

Identification of amacrine subtypes that express the atypical cadherin celsr3.

Alaron A Lewis, Joseph T Mahoney, Neil Wilson, Susan E Brockerhoff

Open access · greenAbstract read
In one paragraph

Article in Experimental eye research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Color Processing in Zebrafish Retina.Frontiers in cellular neuroscience · 2018
    Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alaron A LewisDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA.
Joseph T MahoneyDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA.
Neil WilsonDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA.
Susan E BrockerhoffDepartment of Biochemistry, University of Washington, Seattle, WA 98195, USA. Electronic address: sbrocker@uw.edu.
University of Washington · US

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI MAUREEN E NEITZ · 1985 to 2026
$23.5M
Genetic Analysis of Retinal Cone Photoreceptor FunctionR01EY015165 · NEI · UNIVERSITY OF WASHINGTON · PI BROCKERHOFF, SUSAN E · 2003 to 2015
$3.1M
Photoreceptor degeneration and rescue in zebrafishR01EY018814 · NEI · UNIVERSITY OF WASHINGTON · PI BROCKERHOFF, SUSAN E · 2009 to 2012
$1.9M
NEI NIH HHS EY015165NEI NIH HHS EY018814NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY015165NEI NIH HHS R01 EY018814
6 · The paper itself

Abstract

We previously identified Celsr3, an atypical cadherin, as essential for normal inhibitory circuit formation in the inner retina. Its absence during retinal development leads to increases in GABA receptor numbers on ON-bipolar cell terminals and consequent changes in retinal physiology, but does not cause obvious cell spacing or synaptic lamination defects. This study focuses on defining the subset of amacrine cells that express celsr3 during development of the wild type zebrafish retina. We have developed a BAC transgene expressing EGFP under the control of celsr3 promoter, Tg(celsr3:EGFP). Similar to the retinal expression of the endogenous gene, the transgene is expressed in amacrine, ganglion and bipolar, but not horizontal or photoreceptor cells. We transiently expressed the BAC in zebrafish larvae and categorized 104 celsr3 expressing amacrine cells based on their shape, arborization and lamination. Ten different amacrine cell types express Tg(celsr3:EGFP). These include narrow, medium and wide-field types of varicose cells. There are many multistratified cells, including one not previously identified and a few specific types of monostratified amacrine cells. Non-varicose amacrine cells do not express the transgene. We propose that celsr3 expression in varicose amacrine cells is key to this molecule's function in circuitry formation during retinal development. The BAC transgene we have developed provides a useful tool to study Celsr3 function.

Indexed as

Amacrine CellsAnimalsCadherinsChromosomes, Artificial, BacterialEmbryo, NonmammalianGene Expression RegulationGreen Fluorescent ProteinsImmunohistochemistryMicroscopy, ConfocalPromoter Regions, GeneticRNA, MessengerTransgenesZebrafishZebrafish ProteinsCadherinsCelsr3 protein, zebrafishenhanced green fluorescent proteinGreen Fluorescent ProteinsRNA, MessengerZebrafish ProteinsAmacrine cellsCadherinCircuitryRetinaZebrafish

Identifiers

PMID25479044
PMCPMC4276509
OpenAlexW2076978571

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.