Evidence map›Paper›PMID 25477475›Full record

ArticleThe Annals of occupational hygiene2015

Using hierarchical cluster models to systematically identify groups of jobs with similar occupational questionnaire response patterns to assist rule-based expert exposure assessment in population-based studies.

Melissa C Friesen, Susan M Shortreed, David C Wheeler, Igor Burstyn, Roel Vermeulen, Anjoeka Pronk, Joanne S Colt, Dalsu Baris, Margaret R Karagas, Molly Schwenn and 4 more

Abstract read
In one paragraph

Article in The Annals of occupational hygiene, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Melissa C Friesen1.Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA friesenmc@mail.nih.gov.
Susan M Shortreed2.Biostatistics, Group Health Research Institute, Seattle, WA 98101-1448, USA.
David C Wheeler1.Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA 3.Department of Biostatistics, Virginia Commonwealth University, Richmond, VA 23298, USA.
Igor Burstyn4.Department of Environmental and Occupational Health, Drexel University, Philadelphia, PA 19104, USA.
Roel Vermeulen5.Utrecht University, Utrecht, The Netherlands.
Anjoeka Pronk6.TNO, Utrecht, The Netherlands.
Joanne S Colt1.Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.
Dalsu Baris1.Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.
Margaret R Karagas7.Geisel School of Medicine at Dartmouth, Hanover, NH 03756, USA.
Molly Schwenn8.Maine Cancer Registry, Augusta, ME 04333-0011, USA.
Alison Johnson9.Vermont Cancer Registry, Burlington, VT 05402-0070, USA.
Karla R Armenti10.New Hampshire Department of Health and Human Services, Division of Public Health Services, Bureau of Public Health Statistics and Informatics, Concord, NH 03301, USA.
Debra T Silverman1.Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.
Kai Yu11.Biostatistics, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD 20892, USA.

Funding

Occupational Exposure AssessmentZIACP010122 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI FRIESEN, MELISSA · 2009 to 2025
$8.6M
STUDIES OF OCCUPATIONAL CANCER--OCCUPATIONAL EXPOSURE ASSESSMENTZ01CP010122 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI DOSEMECI, MUSTAFA · 1996 to 2008
$83k
NCI NIH HHS Z01 CP10122-19
6 · The paper itself

Abstract

objectivesRule-based expert exposure assessment based on questionnaire response patterns in population-based studies improves the transparency of the decisions. The number of unique response patterns, however, can be nearly equal to the number of jobs. An expert may reduce the number of patterns that need assessment using expert opinion, but each expert may identify different patterns of responses that identify an exposure scenario. Here, hierarchical clustering methods are proposed as a systematic data reduction step to reproducibly identify similar questionnaire response patterns prior to obtaining expert estimates. As a proof-of-concept, we used hierarchical clustering methods to identify groups of jobs (clusters) with similar responses to diesel exhaust-related questions and then evaluated whether the jobs within a cluster had similar (previously assessed) estimates of occupational diesel exhaust exposure.

methodsUsing the New England Bladder Cancer Study as a case study, we applied hierarchical cluster models to the diesel-related variables extracted from the occupational history and job- and industry-specific questionnaires (modules). Cluster models were separately developed for two subsets: (i) 5395 jobs with ≥1 variable extracted from the occupational history indicating a potential diesel exposure scenario, but without a module with diesel-related questions; and (ii) 5929 jobs with both occupational history and module responses to diesel-relevant questions. For each subset, we varied the numbers of clusters extracted from the cluster tree developed for each model from 100 to 1000 groups of jobs. Using previously made estimates of the probability (ordinal), intensity (µg m(-3) respirable elemental carbon), and frequency (hours per week) of occupational exposure to diesel exhaust, we examined the similarity of the exposure estimates for jobs within the same cluster in two ways. First, the clusters' homogeneity (defined as >75% with the same estimate) was examined compared to a dichotomized probability estimate (<5 versus ≥5%; <50 versus ≥50%). Second, for the ordinal probability metric and continuous intensity and frequency metrics, we calculated the intraclass correlation coefficients (ICCs) between each job's estimate and the mean estimate for all jobs within the cluster.

resultsWithin-cluster homogeneity increased when more clusters were used. For example, ≥80% of the clusters were homogeneous when 500 clusters were used. Similarly, ICCs were generally above 0.7 when ≥200 clusters were used, indicating minimal within-cluster variability. The most within-cluster variability was observed for the frequency metric (ICCs from 0.4 to 0.8). We estimated that using an expert to assign exposure at the cluster-level assignment and then to review each job in non-homogeneous clusters would require ~2000 decisions per expert, in contrast to evaluating 4255 unique questionnaire patterns or 14983 individual jobs.

conclusionsThis proof-of-concept shows that using cluster models as a data reduction step to identify jobs with similar response patterns prior to obtaining expert ratings has the potential to aid rule-based assessment by systematically reducing the number of exposure decisions needed. While promising, additional research is needed to quantify the actual reduction in exposure decisions and the resulting homogeneity of exposure estimates within clusters for an exposure assessment effort that obtains cluster-level expert assessments as part of the assessment process.

Indexed as

Models, TheoreticalOccupationsAir Pollutants, OccupationalCase-Control StudiesEnvironmental MonitoringHumansOccupational ExposureParticulate MatterPopulation SurveillanceResearch DesignSurveys and QuestionnairesTime FactorsVehicle EmissionsAir Pollutants, OccupationalParticulate MatterVehicle Emissionscase–control studiesdiesel exhausthierarchical clustersoccupational exposures

Identifiers

PMID25477475
PMCPMC4385262

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.