Evidence map›Paper›PMID 25476450›Full record

ArticleThe EMBO journal2015

Quantitative comparison of a human cancer cell surface proteome between interphase and mitosis.

Nurhan Özlü, Mohammad H Qureshi, Yusuke Toyoda, Bernhard Y Renard, Gürkan Mollaoglu, Nazlı E Özkan, Selda Bulbul, Ina Poser, Wiebke Timm, Anthony A Hyman and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

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  11. Membrane and organelle dynamics during cell division.Nature reviews. Molecular cell biology · 2020
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  13. The Unusual Suspects in Cytokinesis: Fitting the Pieces Together.Frontiers in cell and developmental biology · 2020
    Review
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  20. Integrated Microfluidics for Protein Modification Discovery.Molecular & cellular proteomics : MCP · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Nurhan ÖzlüDepartment of Molecular Biology and Genetics, Koç University, Istanbul, Turkey Proteomics Center at Children's Hospital Boston, Boston, MA, USA Department of Systems Biology, Harvard Medical School, Boston, MA, USA nozlu@ku.edu.tr.
Mohammad H QureshiDepartment of Molecular Biology and Genetics, Koç University, Istanbul, Turkey.
Yusuke ToyodaMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.
Bernhard Y RenardResearch Group Bioinformatics (NG 4), Robert Koch-Institute, Berlin, Germany.
Gürkan MollaogluDepartment of Molecular Biology and Genetics, Koç University, Istanbul, Turkey.
Nazlı E ÖzkanDepartment of Molecular Biology and Genetics, Koç University, Istanbul, Turkey.
Selda BulbulDepartment of Molecular Biology and Genetics, Koç University, Istanbul, Turkey.
Ina PoserMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.
Wiebke TimmProteomics Center at Children's Hospital Boston, Boston, MA, USA.
Anthony A HymanMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.
Timothy J MitchisonDepartment of Systems Biology, Harvard Medical School, Boston, MA, USA.
Judith A SteenProteomics Center at Children's Hospital Boston, Boston, MA, USA Department of Neurobiology, Harvard Medical School and Children's Hospital Boston, Boston, MA, USA.
Koç University · TRMax Planck Institute of Molecular Cell Biology and Genetics · DEBoston Children's Hospital · USHarvard University · USRobert Koch Institute · DE

Funding

GENETIC AND BIOCHEMICAL ANALYSIS OF CYTOKINESISR01GM023928 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI MITCHISON, TIMOTHY J · 1985 to 2010
$3.6M
NIGMS NIH HHS 3R01GM23928-31S1NIGMS NIH HHS R01 GM023928
6 · The paper itself

Abstract

The cell surface is the cellular compartment responsible for communication with the environment. The interior of mammalian cells undergoes dramatic reorganization when cells enter mitosis. These changes are triggered by activation of the CDK1 kinase and have been studied extensively. In contrast, very little is known of the cell surface changes during cell division. We undertook a quantitative proteomic comparison of cell surface-exposed proteins in human cancer cells that were tightly synchronized in mitosis or interphase. Six hundred and twenty-eight surface and surface-associated proteins in HeLa cells were identified; of these, 27 were significantly enriched at the cell surface in mitosis and 37 in interphase. Using imaging techniques, we confirmed the mitosis-selective cell surface localization of protocadherin PCDH7, a member of a family with anti-adhesive roles in embryos. We show that PCDH7 is required for development of full mitotic rounding pressure at the onset of mitosis. Our analysis provided basic information on how cell cycle progression affects the cell surface. It also provides potential pharmacodynamic biomarkers for anti-mitotic cancer chemotherapy.

Indexed as

BiomarkersBiotinylationCadherinsChromatography, AffinityHeLa CellsHumansInterphaseMCF-7 CellsMembrane ProteinsMitosisProteomeProteomicsProtocadherinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationBiomarkersCadherinsMembrane ProteinsPCDH7 protein, humanProteomeProtocadherinscell cyclecell roundingcell surfacePCDH7SILAC

Identifiers

PMID25476450
PMCPMC4337065
OpenAlexW2098930692

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.