Evidence map›Paper›PMID 25476267›Full record

ArticleProtein engineering, design & selection : PEDS2015

Engineering the respiratory membrane-bound hydrogenase of the hyperthermophilic archaeon Pyrococcus furiosus and characterization of the catalytically active cytoplasmic subcomplex.

Patrick M McTernan, Sanjeev K Chandrayan, Chang-Hao Wu, Brian J Vaccaro, W Andrew Lancaster, Michael W W Adams

Open access · bronzeAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Patrick M McTernanDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA.
Sanjeev K ChandrayanDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA.
Chang-Hao WuDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA.
Brian J VaccaroDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA.
W Andrew LancasterDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602-7229, USA adams@bmb.uga.edu.
University of Georgia · US

Funding

Purchase of a Thermo Fisher Scientific LTQ Orbitrap XL Mass SpectrometerS10RR028859 · NCRR · UNIVERSITY OF GEORGIA · PI AMSTER, I JONATHAN · 2011 to 2011
$832k
NCRR NIH HHS S10 RR028859
6 · The paper itself

Abstract

The archaeon Pyrococcus furiosus grows optimally at 100°C by converting carbohydrates to acetate, carbon dioxide and hydrogen gas (H2), obtaining energy from a respiratory membrane-bound hydrogenase (MBH). This conserves energy by coupling H2 production to oxidation of reduced ferredoxin with generation of a sodium ion gradient. MBH is classified as a Group 4 hydrogenase and is encoded by a 14-gene operon that contains hydrogenase and Na(+)/H(+) antiporter modules. Herein a His-tagged 4-subunit cytoplasmic subcomplex of MBH (C-MBH) was engineered and expressed in P. furiosus by differential transcription of the MBH operon. It was purified under anaerobic conditions by affinity chromatography without detergent. Purified C-MBH had a Fe : Ni ratio of 14 : 1, similar to the predicted value of 13 : 1. The O2 sensitivities of C-MBH and the 14-subunit membrane-bound version were similar (half-lives of ∼15 h in air), but C-MBH was more thermolabile (half-lives at 90°C of 8 and 25 h, respectively). C-MBH evolved H2 with the physiological electron donor, reduced ferredoxin, optimally at 60°C. This is the first report of the engineering and characterization of a soluble catalytically active subcomplex of a membrane-bound respiratory hydrogenase.

Indexed as

Archaeal ProteinsHydrogenaseMembrane ProteinsProtein EngineeringProtein SubunitsPyrococcus furiosusArchaeal ProteinsHydrogenaseMembrane ProteinsProtein SubunitsArchaeaDifferential expressionHydrogenaseMembrane protein

Identifiers

PMID25476267
PMCPMC6373663
OpenAlexW2321973309

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.