Evidence map›Paper›PMID 25474156›Full record

ArticlePLoS genetics2014

Transcriptional frameshifting rescues Citrobacter rodentium type VI secretion by the production of two length variants from the prematurely interrupted tssM gene.

Erwan Gueguen, Norma M Wills, John F Atkins, Eric Cascales

Abstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. AnMicrobiology spectrum · 2026
    Article
  2. Article
  3. Microbiology (Reading, England) · 2024
    Article
  4. Article
  5. Review
  6. Article
  7. The Virulence Effect of CpxRA inFrontiers in cellular and infection microbiology · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Productive mRNA stem loop-mediated transcriptional slippage: Crucial features in common with intrinsic terminators.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Erwan GueguenLaboratoire d'Ingénierie des Systèmes Macromoléculaires (LISM), Institut de Microbiologie de la Méditerranée, CNRS - Aix-Marseille Université, UMR 7255, Marseille, France.
Norma M WillsDepartment of Human Genetics, University of Utah, Salt Lake City, Utah, United States of America.
John F AtkinsDepartment of Human Genetics, University of Utah, Salt Lake City, Utah, United States of America; Departments of Biochemistry and Microbiology, University College Cork, Cork, Ireland.
Eric CascalesLaboratoire d'Ingénierie des Systèmes Macromoléculaires (LISM), Institut de Microbiologie de la Méditerranée, CNRS - Aix-Marseille Université, UMR 7255, Marseille, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Type VI secretion system (T6SS) mediates toxin delivery into both eukaryotic and prokaryotic cells. It is composed of a cytoplasmic structure resembling the tail of contractile bacteriophages anchored to the cell envelope through a membrane complex composed of the TssL and TssM inner membrane proteins and of the TssJ outer membrane lipoprotein. The C-terminal domain of TssM is required for its interaction with TssJ, and for the function of the T6SS. In Citrobacter rodentium, the tssM1 gene does not encode the C-terminal domain. However, the stop codon is preceded by a run of 11 consecutive adenosines. In this study, we demonstrate that this poly-A tract is a transcriptional slippery site that induces the incorporation of additional adenosines, leading to frameshifting, and hence the production of two TssM1 variants, including a full-length canonical protein. We show that both forms of TssM1, and the ratio between these two forms, are required for the function of the T6SS in C. rodentium. Finally, we demonstrate that the tssM gene associated with the Yersinia pseudotuberculosis T6SS-3 gene cluster is also subjected to transcriptional frameshifting.

Indexed as

Codon, NonsenseAmino Acid SequenceBacterial ProteinsBacterial Secretion SystemsBase SequenceCitrobacter rodentiumFrameshift MutationMembrane ProteinsMolecular Sequence DataOrganisms, Genetically ModifiedProtein IsoformsSequence Analysis, DNASuppression, GeneticBacterial ProteinsBacterial Secretion SystemsCodon, NonsenseMembrane ProteinsProtein Isoforms

Identifiers

PMID25474156
PMCPMC4256274

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.