Evidence map›Paper›PMID 25474111›Full record

ArticlePloS one2014

Morphology, carbohydrate composition and vernalization response in a genetically diverse collection of Asian and European turnips (Brassica rapa subsp. rapa).

Ningwen Zhang, Jianjun Zhao, Frederic Lens, Joan de Visser, Temesgen Menamo, Wen Fang, Dong Xiao, Johan Bucher, Ram Kumar Basnet, Ke Lin and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  4. The clonal growth inPlant signaling & behavior · 2022
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  6. Selection of superior accessions of turnip (Food science & nutrition · 2022
    Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Ningwen ZhangWageningen UR Plant Breeding, Wageningen, The Netherlands.
Jianjun ZhaoWageningen UR Plant Breeding, Wageningen, The Netherlands; Horticultural College, Hebei Agricultural University, Baoding, China.
Frederic LensNaturalis Biodiversity Center, Leiden, The Netherlands.
Joan de VisserWageningen UR Plant Breeding, Wageningen, The Netherlands.
Temesgen MenamoWageningen UR Plant Breeding, Wageningen, The Netherlands.
Wen FangWageningen UR Plant Breeding, Wageningen, The Netherlands.
Dong XiaoWageningen UR Plant Breeding, Wageningen, The Netherlands; State Key Laboratory of Crop Genetics and Germplasm Enhancement, Horticultural College, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Johan BucherWageningen UR Plant Breeding, Wageningen, The Netherlands.
Ram Kumar BasnetWageningen UR Plant Breeding, Wageningen, The Netherlands.
Ke LinWageningen UR Plant Breeding, Wageningen, The Netherlands.
Feng ChengInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaowu WangInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China.
Guusje BonnemaWageningen UR Plant Breeding, Wageningen, The Netherlands.
Institute of Vegetables and Flowers · CNHebei Agricultural University · CNNanjing Agricultural University · CNNaturalis Biodiversity Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brassica rapa displays enormous morphological diversity, with leafy vegetables, turnips and oil crops. Turnips (Brassica rapa subsp. rapa) represent one of the morphotypes, which form tubers and can be used to study the genetics underlying storage organ formation. In the present study we investigated several characteristics of an extensive turnip collection comprising 56 accessions from both Asia (mainly Japanese origin) and Europe. Population structure was calculated using data from 280 evenly distributed SNP markers over 56 turnip accessions. We studied the anatomy of turnip tubers and measured carbohydrate composition of the mature turnip tubers of a subset of the collection. The variation in 16 leaf traits, 12 tuber traits and flowering time was evaluated in five independent experiments for the entire collection. The effect of vernalization on flowering and tuber formation was also investigated. SNP marker profiling basically divided the turnip accessions into two subpopulations, with admixture, generally corresponding with geographical origin (Europe or Asia). The enlarged turnip tuber consists of both hypocotyl and root tissue, but the proportion of the two tissues differs between accessions. The ratio of sucrose to fructose and glucose differed among accessions, while generally starch content was low. The evaluated traits segregated in both subpopulations, with leaf shape, tuber colour and number of shoots per tuber explaining most variation between the two subpopulations. Vernalization resulted in reduced flowering time and smaller tubers for the Asian turnips whereas the European turnips were less affected by vernalization.

Indexed as

Genetic VariationAsiaBrassica rapaCarbohydratesCrops, AgriculturalEuropeFlowersHumansPhenotypePlant LeavesPlant RootsQuantitative Trait LociCarbohydrates

Identifiers

PMID25474111
PMCPMC4256417
OpenAlexW2159617856

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.