Evidence map›Paper›PMID 25473326›Full record

ArticleBiodiversity data journal2014

Streamlining the use of BOLD specimen data to record species distributions: a case study with ten Nearctic species of Microgastrinae (Hymenoptera: Braconidae).

Jose L Fernandez-Triana, Lyubomir Penev, Sujeevan Ratnasingham, M Alex Smith, Jayme Sones, Angela Telfer, Jeremy R deWaard, Paul D N Hebert

Open access · goldAbstract read
In one paragraph

Article in Biodiversity data journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Jose L Fernandez-TrianaCanadian National Collection of Insects, Ottawa, and the Biodiversity Institute of Ontario, University of Guelph, Ottawa, Canada.
Lyubomir PenevPensoft, Sofia, Bulgaria.
Sujeevan RatnasinghamUniversity of Guelph, Guelph, Canada.
M Alex SmithDepartment of Integrative Biology, Guelph, Canada.
Jayme SonesUniversity of Guelph, Guelph, Canada.
Angela TelferUniversity of Guelph, Guelph, Canada.
Jeremy R deWaardBiodiversity Institute of Ontario, University of Guelph, Guelph, Canada.
Paul D N HebertBiodiversity Institute of Ontario, University of Guelph, Guelph, Canada.
University of Guelph · CANational Biodiversity Institute · CRPensoft Publishers (Bulgaria) · BG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Barcode of Life Data Systems (BOLD) is designed to support the generation and application of DNA barcode data, but it also provides a unique source of data with potential for many research uses. This paper explores the streamlining of BOLD specimen data to record species distributions - and its fast publication using the Biodiversity Data Journal (BDJ), and its authoring platform, the Pensoft Writing Tool (PWT). We selected a sample of 630 specimens and 10 species of a highly diverse group of parasitoid wasps (Hymenoptera: Braconidae, Microgastrinae) from the Nearctic region and used the information in BOLD to uncover a significant number of new records (of locality, provinces, territories and states). By converting specimen information (such as locality, collection date, collector, voucher depository) from the BOLD platform to the Excel template provided by the PWT, it is possible to quickly upload and generate long lists of "Material Examined" for papers discussing taxonomy, ecology and/or new distribution records of species. For the vast majority of publications including DNA barcodes, the generation and publication of ancillary data associated with the barcoded material is seldom highlighted and often disregarded, and the analysis of those data sets to uncover new distribution patterns of species has rarely been explored, even though many BOLD records represent new and/or significant discoveries. The introduction of journals specializing in - and streamlining - the release of these datasets, such as the BDJ, should facilitate thorough analysis of these records, as shown in this paper.

Indexed as

Barcode of Life Data SystemsMicrogastrinaeNearcticPensoft Writing ToolSpecies distribution recordsstreamlining data

Identifiers

PMID25473326
PMCPMC4251541
OpenAlexW2150563206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.