Evidence map›Paper›PMID 25471355›Full record

ArticleThe European journal of neuroscience2015

Caged compounds for multichromic optical interrogation of neural systems.

Joseph M Amatrudo, Jeremy P Olson, Hitesh K Agarwal, Graham C R Ellis-Davies

Open access · greenAbstract read
In one paragraph

Article in The European journal of neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
  3. CaCell reports · 2024
    Article
  4. Bidirectional Neuronal Actuation by Uncaging with Violet and Green Light.Angewandte Chemie (International ed. in English) · 2024
    Article
  5. Blue and Green Light Responsive Caged Glutamate.Journal of photochemistry and photobiology. A, Chemistry · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Advances in Two-Photon Imaging in Plants.Plant & cell physiology · 2021
    Review
  10. Neural and behavioral control inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Useful Caged Compounds for Cell Physiology.Accounts of chemical research · 2020
    Article
  13. Article
  14. Optofluidic control of rodent learning using cloaked caged glutamate.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joseph M AmatrudoDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY, 10029, USA.
Jeremy P Olson
Hitesh K Agarwal
Graham C R Ellis-Davies
Icahn School of Medicine at Mount Sinai · US

Funding

PHOTOCHEMICAL REGULATION OF CALCIUM IN CELL PHYSIOLOGYR01GM053395 · NIGMS · OREGON HEALTH AND SCIENCE UNIVERSITY · PI ELLIS-DAVIES, GRAHAM · 1995 to 2020
$6.1M
Optical probes for controlling cellular functionR01NS069720 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ELLIS-DAVIES, GRAHAM · 2010 to 2017
$3.2M
A light-regulated protein tagging method to study local translation in neuronsR21DA035612 · NIDA · COLD SPRING HARBOR LABORATORY · PI ELLIS-DAVIES, GRAHAM, HANNON, GREGORY J · 2013 to 2014
$464k
NIDA NIH HHS DA035612NIDA NIH HHS R21 DA035612NIGMS NIH HHS GM053395NIGMS NIH HHS R01 GM053395NINDS NIH HHS NS069720NINDS NIH HHS R01 NS069720
6 · The paper itself

Abstract

Caged compounds are widely used by neurophysiologists to study many aspects of cellular signaling in glia and neurons. Biologically inert before irradiation, they can be loaded into cells via patch pipette or topically applied in situ to a defined concentration; photolysis releases the caged compound in a very rapid and spatially defined way. As caged compounds are exogenous optical probes, they include not only natural products such neurotransmitters, calcium and IP3 but non-natural products such as fluorophores, drugs and antibodies. In this Technical Spotlight we provide a short introduction to the uncaging technique by discussing the nitroaromatic caging chromophores most widely used in such experiments [e.g. α-carboxy-ortho-nitrobenyl (CNB), dimethoxynitrobenzyl (DMNB), 4-methoxy-7-nitroindolinyl (MNI) and 4-carboxymethoxy-7-nitroindolinyl (CDNI)]. We show that recently developed caging chromophores [rutheniumbipyridial (RuBi) and 7-diethylaminocoumarin (DEAC)450] that are photolyzed with blue light (~ 430-480 nm range) can be combined with traditional nitroaromatic caged compounds to enable two-color optical probing of neuronal function. For example, one-photon uncaging of either RuBi-GABA or DEAC450-GABA with a 473-nm laser is facile, and can block nonlinear currents (dendritic spikes or action potentials) evoked by two-photon uncaging of CDNI-Glu at 720 nm. We also show that two-photon uncaging of DEAC450-Glu and CDNI-GABA at 900 and 720 nm, respectively, can be used to fire and block action potentials. Our experiments illustrate that recently developed chromophores have taken uncaging out of the 'monochrome era', in which it has existed since 1978, so as to enable multichromic interrogation of neuronal function with single-synapse precision.

Indexed as

Indicators and ReagentsAnimalsNeuronsOptical ImagingPhotochemical ProcessesIndicators and Reagentsdendritic spikesmultichromicspinestwo-photonuncaging

Identifiers

PMID25471355
PMCPMC4286288
OpenAlexW2010616581

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.