Evidence map›Paper›PMID 25471219›Full record

ArticleBMC infectious diseases2014

Identifying an appropriate PCV for use in Senegal, recent insights concerning Streptococcus pneumoniae NP carriage and IPD in Dakar.

Fatim Ba, Abdoulaye Seck, Mamadou Bâ, Aliou Thiongane, Moussa Fafa Cissé, Khady Seck, Madeleine Ndour, Pascal Boisier, Benoit Garin

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Changes in the Molecular Epidemiology of Pediatric Bacterial Meningitis in Senegal After Pneumococcal Conjugate Vaccine Introduction.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Fatim BaMedical Laboratory, Pasteur Institute, Dakar, Senegal. lafatiz@gmail.com.
Abdoulaye SeckMedical Laboratory, Pasteur Institute, Dakar, Senegal. seck@pasteur.sn.
Mamadou BâPediatric Unit, Albert Royer Hospital, Dakar, Senegal. madouba@gmail.com.
Aliou ThionganePediatric Unit, Albert Royer Hospital, Dakar, Senegal. thionaliou79@yahoo.fr.
Moussa Fafa CisséPediatric Unit, Albert Royer Hospital, Dakar, Senegal. moussafafa@hotmail.sn.
Khady SeckMedina Health Center, Dakar, Senegal. didi_seck03@yahoo.fr.
Madeleine NdourSaint Martin Health Center, Dakar, Senegal. stmartin@sentoo.sn.
Pascal BoisierEpidemiology Units, Pasteur Institute, Yaounde, Cameroun. boisierpas@gmail.com.
Benoit GarinMedical Laboratory, Pasteur Institute, Dakar, Senegal. benoitgarin@gmail.com.
Hôpital Principal de Dakar · SNInstitut Pasteur de Dakar · SNCentre Pasteur du Cameroun · CM

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSince 2000, the Global Alliance for Vaccines and Immunization (GAVI) and WHO have supported the introduction of the Pneumococcal Conjugate Vaccine (PCV) in the immunization programs of developing countries. The highest pneumococcal nasopharyngeal carriage rates have been reported (40-60%) in these countries, and the highest incidence and case fatality rates of pneumococcal infections have been demonstrated in Africa.

methodsStudies concerning nasopharyngeal pneumococcal carriage and pneumococcal infection in children less than 5 years old were conducted in Dakar from 2007 to 2008. Serotype, antibiotic susceptibility and minimum inhibitory concentrations were determined. In addition, among 17 overall publications, 6 manuscripts of the Senegalese literature published from 1972 to 2013 were selected for data comparisons.

resultsAmong the 264 children observed, 132 (50%) children generated a nasopharyngeal (NP) positive culture with Streptococcus pneumoniae. The five most prevalent serotypes, were 6B (9%), 19 F (9%), 23 F (7.6%), 14 (7.6%) and 6A (6.8%). Fifteen percent of the strains (20/132) showed reduced susceptibility to penicillin and 3% (4/132) showed reduced susceptibility to anti-pneumococcal fluoroquinolones. Among the 196 suspected pneumococcal infections, 62 (31.6%) Streptococcus pneumoniae were isolated. Serogroup 1 was the most prevalent serotype (21.3%), followed by 6B (14.9%), 23 F (14.9%) and 5 (8.5%). Vaccine coverage for PCV-7, PCV-10 and PCV-13, were 36.2% (17/47), 66% (31/47) and 70.2% (33/47) respectively. Reduced susceptibility to penicillin and anti-pneumococcal fluoroquinolones was 6.4% and 4.3%, respectively, and the overall lethality was 42.4% (14/33).

conclusionsThis study confirms a high rate of carriage and disease caused by Streptococcus pneumoniae serotypes contained within the current generation of pneumococcal conjugate vaccines and consistent with reports from other countries in sub-Saharan Africa prior to PCV introduction. Antimicrobial resistance in this small unselected sample confirms a low rate of antibiotic resistance. Case-fatality is high. Introduction of a high valency pneumococcal vaccine should be a priority for health planners with the establishment of an effective surveillance system to monitor post vaccine changes.

Indexed as

Pneumococcal VaccinesAfrica South of the SaharaAnti-Bacterial AgentsCarrier StateChild, PreschoolHumansIncidenceInfantMaleMicrobial Sensitivity TestsNasopharynxPneumococcal InfectionsSenegalStreptococcus pneumoniaeVaccinationVaccines, ConjugateAnti-Bacterial AgentsPneumococcal VaccinesVaccines, Conjugate

Identifiers

PMID25471219
PMCPMC4258793
OpenAlexW1964432248

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.