Evidence map›Paper›PMID 25468971›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Full-length structure of a monomeric histidine kinase reveals basis for sensory regulation.

Giomar Rivera-Cancel, Wen-huang Ko, Diana R Tomchick, Fernando Correa, Kevin H Gardner

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 101 citations in OpenAlex.

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  11. The blue light-dependent LOV-protein LdaP ofFrontiers in microbiology · 2024
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  16. Mode of autophosphorylation in bacteriophytochromes RpBphP2 and RpBphP3.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Giomar Rivera-CancelDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816;
Wen-huang KoDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816;
Diana R TomchickDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816;
Fernando CorreaDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816; Structural Biology Initiative, City University of New York Advanced Science Research Center, New York, NY 10031; and.
Kevin H GardnerDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-8816; Structural Biology Initiative, City University of New York Advanced Science Research Center, New York, NY 10031; and Department of Chemistry, City College of New York, New York, NY 10031 Kevin.Gardner@asrc.cuny.edu.ORCID http://orcid.org/0000-0002-8671-2556
The University of Texas Southwestern Medical Center · USThe Graduate Center, CUNY · US

Funding

Summer Undergraduate Research Support - Ms. Anastasiia FisiukR01GM106239 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GARDNER, KEVIN H · 2013 to 2024
$4.5M
Structural studies of PAS domain signaling mechanismsR01GM081875 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GARDNER, KEVIN H · 2007 to 2010
$1.2M
NIGMS NIH HHS R01 GM081875NIGMS NIH HHS R01 GM106239
6 · The paper itself

Abstract

Although histidine kinases (HKs) are critical sensors of external stimuli in prokaryotes, the mechanisms by which their sensor domains control enzymatic activity remain unclear. Here, we report the full-length structure of a blue light-activated HK from Erythrobacter litoralis HTCC2594 (EL346) and the results of biochemical and biophysical studies that explain how it is activated by light. Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer. Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain. The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark. Upon light stimulation, interdomain interactions weaken to facilitate activation. Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation. We suggest parallels between EL346 and dimeric HKs, with sensor-induced movements in the DHp similarly remodeling the DHp/CA interface as part of activation.

Indexed as

Models, MolecularChromatography, GelChromatography, LiquidComputational BiologyCrystallizationDimerizationEscherichia coliHistidine KinaseMagnetic Resonance SpectroscopyMass SpectrometryProtein ConformationProtein KinasesSignal TransductionSphingomonadaceaeX-Ray DiffractionHistidine KinaseProtein Kinasescell signalinghistidine kinasephotosensoryregulationtwo-component system

Identifiers

PMID25468971
PMCPMC4273353
OpenAlexW1968743635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.