Evidence map›Paper›PMID 25468652›Full record

ArticleMolecular genetics and metabolism2015

The alpha-galactosidase A p.Arg118Cys variant does not cause a Fabry disease phenotype: data from individual patients and family studies.

Susana Ferreira, Alberto Ortiz, Dominique P Germain, Miguel Viana-Baptista, António Caldeira-Gomes, Marta Camprecios, Maria Fenollar-Cortés, Ángel Gallegos-Villalobos, Diego Garcia, José Antonio García-Robles and 11 more

Open access · greenAbstract read
In one paragraph

Article in Molecular genetics and metabolism, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 88 citations in OpenAlex.

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  13. Phenotyping of a novelFrontiers in genetics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 16 institutions in 4 countries.

Susana FerreiraDepartamento de Genética, Faculdade de Medicina, Universidade do Porto, 4200-319 Porto, Portugal. Electronic address: susanadg@med.up.pt.
Alberto OrtizServicio de Nefrología, Instituto de Investigación Sanitaria IIS-Fundación Jiménez Diaz, School of Medicine, Universidad Autónoma de Madrid, Madrid, Spain. Electronic address: aortiz@fjd.es.
Dominique P GermainUniversity of Versailles, UFR des sciences de la santé Simone Veil, Division of Medical Genetics, 78180 Montigny, France. Electronic address: dominique.germain@uvsq.fr.
Miguel Viana-BaptistaServiço de Neurologia, Hospital Egas Moniz, Centro Hospitalar Lisboa Ocidental, Centro de Estudo de Doenças Crónicas (CEDOC), Faculdade de Ciências Médicas, Universidade Nova de Lisboa, Lisboa, Portugal. Electronic address: mvianabaptista@fcm.unl.pt.
António Caldeira-GomesServiço de Nefrologia, Centro Hospitalar de São João, 4200-319 Porto, Portugal. Electronic address: viladoconde@diaverum.com.
Marta CampreciosServicio de Cardiología, Hospital Moisès Broggi, Sant Joan Despí, Barcelona, Spain.
Maria Fenollar-CortésLaboratorio de Genética Clínica, Servicio de Análisis Clínicos, Hospital Clínico Universitario San Carlos, Madrid, Spain. Electronic address: mariadelmar.fenollar@salud.madrid.org.
Ángel Gallegos-VillalobosServicio de Nefrología, Instituto de Investigación Sanitaria IIS-Fundación Jiménez Diaz, School of Medicine, Universidad Autónoma de Madrid, Madrid, Spain. Electronic address: angelgallegos.nefro@gmail.com.
Diego GarciaHealth In Code, Hospital Marítimo de Oza, A Coruña, Spain.
José Antonio García-RoblesServicio de Cardiología, Hospital General Universitario Gregorio Marañón, Madrid, Spain.
Jesús EgidoServicio de Nefrología, Instituto de Investigación Sanitaria IIS-Fundación Jiménez Diaz, School of Medicine, Universidad Autónoma de Madrid, Madrid, Spain. Electronic address: jegido@fjd.es.
Eduardo Gutiérrez-RivasServicio de Neurología, Hospital Universitario 12 de Octubre, Madrid, Spain.
José Antonio HerreroServicio de Nefrología, Hospital Clínico Universitario San Carlos, Madrid, Spain.
Sebastián MasServicio de Nefrología, Instituto de Investigación Sanitaria IIS-Fundación Jiménez Diaz, School of Medicine, Universidad Autónoma de Madrid, Madrid, Spain. Electronic address: smas@fjd.es.
Raluca OanceaLaboratorio de Genética Clínica, Servicio de Análisis Clínicos, Instituto de Investigación Sanitaria, Hospital Clínico Universitario San Carlos, Madrid, Spain.
Paloma PéresServicio de Cardiología, Hospital Universitario Infanta Leonor, Madrid, Spain.
Luis Manuel Salazar-MartínMédico de atención primaria, Calzadilla, Cáceres, Spain.
Jesús Solera-GarciaInstituto de Genética Médica y Molecular, Instituto de Investigación Sanitaria del Hospital Universitario La Paz, Madrid, Spain.
Helena AlvesCentro de Histocompatibilidade do Norte, Porto, Portugal. Electronic address: helena.d.alves@gmail.com.
Scott C GarmanDepartment of Biochemistry and Molecular Biology, University of Massachusetts, Amherst, MA, USA. Electronic address: garman@biochem.umass.edu.
João Paulo OliveiraDepartamento de Genética, Faculdade de Medicina, Universidade do Porto, 4200-319 Porto, Portugal; Serviço de Nefrologia, Centro Hospitalar de São João, 4200-319 Porto, Portugal; Consulta de Genética Médica, Centro Hospitalar de São João, 4200-319 Porto, Portugal. Electronic address: jpo@med.up.pt.
Hospital Clínico San Carlos · ESHospital Universitario Fundación Jiménez Díaz · ESUniversidade do Porto · PTCentro Hospitalar do Porto · PTComplejo Hospitalario de Cáceres · ESHospital de Sant Joan Despí Moisès Broggi · ESHospital de São João · PTHospital General Universitario Gregorio Marañón · ESHospital Universitario 12 De Octubre · ESHospital Universitario Infanta Leonor · ESHospital Universitario La Paz · ESUniversidad Autónoma de Madrid · ESUniversidade da Coruña · ESUniversidade Nova de Lisboa · PTUniversité de Versailles Saint-Quentin-en-Yvelines · FRUniversity of Massachusetts Amherst · US

Funding

Structural Studies of Lysosomal Storage DiseasesR01DK076877 · NIDDK · UNIVERSITY OF MASSACHUSETTS AMHERST · PI GARMAN, SCOTT C. · 2007 to 2021
$4.3M
NIDDK NIH HHS R01 DK076877
6 · The paper itself

Abstract

Lysosomal α-galactosidase A (α-Gal) is the enzyme deficient in Fabry disease (FD), an X-linked glycosphingolipidosis caused by pathogenic mutations affecting the GLA gene. The early-onset, multi-systemic FD classical phenotype is associated with absent or severe enzyme deficiency, as measured by in vitro assays, but patients with higher levels of residual α-Gal activity may have later-onset, more organ-restricted clinical presentations. A change in the codon 118 of the wild-type α-Gal sequence, replacing basic arginine by a potentially sulfhydryl-binding cysteine residue - GLA p.(Arg118Cys) -, has been recurrently described in large FD screening studies of high-risk patients. Although the Cys118 allele is associated with high residual α-Gal activity in vitro, it has been classified as a pathogenic mutation, mainly on the basis of theoretical arguments about the chemistry of the cysteine residue. However its pathogenicity has never been convincingly demonstrated by pathology criteria. We reviewed the clinical, biochemical and histopathology data obtained from 22 individuals of Portuguese and Spanish ancestry carrying the Cys118 allele, including 3 homozygous females. Cases were identified either on the differential diagnosis of possible FD manifestations and on case-finding studies (n=11; 4 males), or on unbiased cascade screening of probands' close relatives (n=11; 3 males). Overall, those data strongly suggest that the GLA p.(Arg118Cys) variant does not segregate with FD clinical phenotypes in a Mendelian fashion, but might be a modulator of the multifactorial risk of cerebrovascular disease. The Cys118 allelic frequency in healthy Portuguese adults (n=696) has been estimated as 0.001, therefore not qualifying for "rare" condition.

Indexed as

AdultAllelesalpha-GalactosidaseAmino Acid SubstitutionCodonFabry DiseaseFamily HealthFemaleGene FrequencyGenotypeHumansKidneyMaleMiddle AgedMolecular StructureMutationalpha-GalactosidaseCodonGLA protein, humanFabry diseaseGLA geneR118CVariant p.(Arg118Cys)α-Galactosidase A

Identifiers

PMID25468652
PMCPMC4423738
OpenAlexW2066776157

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.