Evidence map›Paper›PMID 25468345›Full record

ArticleBiophysical journal2014

Scanning x-ray nanodiffraction on Dictyostelium discoideum.

Marius Priebe, Marten Bernhardt, Christoph Blum, Marco Tarantola, Eberhard Bodenschatz, Tim Salditt

Open access · hybridAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 36 citations in OpenAlex.

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  6. The 2018 correlative microscopy techniques roadmap.Journal of physics D: Applied physics · 2018
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Marius PriebeInstitut für Röntgenphysik, Georg-August-Universität Göttingen, Göttingen, Germany.
Marten BernhardtInstitut für Röntgenphysik, Georg-August-Universität Göttingen, Göttingen, Germany.
Christoph BlumMax Planck Institute for Dynamics and Self-Organization, Göttingen, Germany.
Marco TarantolaMax Planck Institute for Dynamics and Self-Organization, Göttingen, Germany.
Eberhard BodenschatzMax Planck Institute for Dynamics and Self-Organization, Göttingen, Germany.
Tim SaldittInstitut für Röntgenphysik, Georg-August-Universität Göttingen, Göttingen, Germany. Electronic address: tsaldit@gwdg.de.
University of Göttingen · DEMax Planck Institute for Dynamics and Self-Organization · DEMax Planck Society · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have performed scanning x-ray nanobeam diffraction experiments on single cells of the amoeba Dictyostelium discoideum. Cells have been investigated in 1), freeze-dried, 2), frozen-hydrated (vitrified), and 3), initially alive states. The spatially resolved small-angle x-ray scattering signal shows characteristic streaklike patterns in reciprocal space, which we attribute to fiber bundles of the actomyosin network. From the intensity distributions, an anisotropy parameter can be derived that indicates pronounced local variations within the cell. In addition to nanobeam small-angle x-ray scattering, we have evaluated the x-ray differential phase contrast in view of the projected electron density. Different experimental aspects of the x-ray experiment, sample preparation, and data analysis are discussed. Finally, the x-ray results are correlated with optical microscopy (differential phase contrast and confocal microscopy of mutant strains with fluorescently labeled actin and myosin II), which have been carried out in live and fixed states, including optical microscopy under cryogenic conditions.

Indexed as

X-Ray DiffractionAnisotropyCell SurvivalDictyosteliumNanoparticlesScattering, Small AngleSoftware

Identifiers

PMID25468345
PMCPMC4255453
OpenAlexW2109469275

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.