Evidence map›Paper›PMID 25466284›Full record

ArticleAmerican journal of human genetics2014

Mutations affecting the BHLHA9 DNA-binding domain cause MSSD, mesoaxial synostotic syndactyly with phalangeal reduction, Malik-Percin type.

Sajid Malik, Ferda E Percin, Dorothea Bornholdt, Beate Albrecht, Antonio Percesepe, Manuela C Koch, Antonio Landi, Barbara Fritz, Rizwan Khan, Sara Mumtaz and 2 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Case Report: Compound heterozygous variants inFrontiers in pediatrics · 2025
    Article
  3. Sequence Variants in theMolecular syndromology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. A Novel Missense Variant ofBioMed research international · 2020
    Article
  10. Review
  11. Article
  12. Noncoding copy-number variations are associated with congenital limb malformation.Genetics in medicine : official journal of the American College of Medical Genetics · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Limb development: a paradigm of gene regulation.Nature reviews. Genetics · 2017
    Review
  18. A novel homozygous missense mutation inHuman genome variation · 2017
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Sajid MalikZentrum fuer Humangenetik, Philipps-Universitaet Marburg, 35033 Marburg, Germany; Department of Animal Sciences, Human Genetics Program, Faculty of Biological Sciences, Quaid-i-Azam University, 45320 Islamabad, Pakistan.
Ferda E PercinDepartment of Medical Genetics, Faculty of Medicine, Gazi University, Besevler, 06500 Ankara, Turkey.
Dorothea BornholdtZentrum fuer Humangenetik, Philipps-Universitaet Marburg, 35033 Marburg, Germany.
Beate AlbrechtInstitut fuer Humangenetik, Universitaetsklinikum Essen, Universitaet Duisburg-Essen, 45147 Essen, Germany.
Antonio PercesepeDepartment of Mother and Child, Medical Genetics Unit, University Hospital of Modena, 41124 Modena, Italy.
Manuela C KochZentrum fuer Humangenetik, Philipps-Universitaet Marburg, 35033 Marburg, Germany.
Antonio LandiDepartment of Hand Surgery and Microsurgery, University Hospital of Modena, 41100 Modena, Italy.
Barbara FritzZentrum fuer Humangenetik, Philipps-Universitaet Marburg, 35033 Marburg, Germany.
Rizwan KhanDepartment of Animal Sciences, Human Genetics Program, Faculty of Biological Sciences, Quaid-i-Azam University, 45320 Islamabad, Pakistan.
Sara MumtazDepartment of Animal Sciences, Human Genetics Program, Faculty of Biological Sciences, Quaid-i-Azam University, 45320 Islamabad, Pakistan.
Nurten A AkarsuDepartment of Medical Genetics, Gene Mapping Laboratory, Hacettepe University Medical Faculty, Sihhiye, 06100 Ankara, Turkey.
Karl-Heinz GrzeschikZentrum fuer Humangenetik, Philipps-Universitaet Marburg, 35033 Marburg, Germany. Electronic address: grzeschi@staff.uni-marburg.de.
Philipps University of Marburg · DEQuaid-i-Azam University · PKUniversity of Modena and Reggio Emilia · ITGazi University · TRHacettepe University · TRUniversity of Duisburg-Essen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesoaxial synostotic syndactyly, Malik-Percin type (MSSD) (syndactyly type IX) is a rare autosomal-recessive nonsyndromic digit anomaly with only two affected families reported so far. We previously showed that the trait is genetically distinct from other syndactyly types, and through autozygosity mapping we had identified a locus on chromosome 17p13.3 for this unique limb malformation. Here, we extend the number of independent pedigrees from various geographic regions segregating MSSD to a total of six. We demonstrate that three neighboring missense mutations affecting the highly conserved DNA-binding region of the basic helix-loop-helix A9 transcription factor (BHLHA9) are associated with this phenotype. Recombinant BHLHA9 generated by transient gene expression is shown to be located in the cytoplasm and the cell nucleus. Transcription factors 3, 4, and 12, members of the E protein (class I) family of helix-loop-helix transcription factors, are highlighted in yeast two-hybrid analysis as potential dimerization partners for BHLHA9. In the presence of BHLHA9, the potential of these three proteins to activate expression of an E-box-regulated target gene is reduced considerably. BHLHA9 harboring one of the three substitutions detected in MSSD-affected individuals eliminates entirely the transcription activation by these class I bHLH proteins. We conclude that by dimerizing with other bHLH protein monomers, BHLHA9 could fine tune the expression of regulatory factors governing determination of central limb mesenchyme cells, a function made impossible by altering critical amino acids in the DNA binding domain. These findings identify BHLHA9 as an essential player in the regulatory network governing limb morphogenesis in humans.

Indexed as

Mutation, MissenseAmino Acid SequenceBasic Helix-Loop-Helix ProteinsBinding SitesDimerizationDNA Mutational AnalysisFemaleFingersGenes, ReporterGenotypeHaplotypesHumansItalyMaleMiddle AgedPakistanBasic Helix-Loop-Helix ProteinsBHLHA9 protein, human

Identifiers

PMID25466284
PMCPMC4259925
OpenAlexW2073053533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.