Evidence map›Paper›PMID 25465896›Full record

ArticleCell calcium2014

In situ Ca2+ titration in the fluorometric study of intracellular Ca2+ binding.

Shane M McMahon, Meyer B Jackson

Open access · greenAbstract read
In one paragraph

Article in Cell calcium, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Shane M McMahonMolecular Biophysics Ph.D. Program, University of Wisconsin, 1111 Highland Ave, Madison WI 53705, United States.
Meyer B JacksonMolecular Biophysics Ph.D. Program, University of Wisconsin, 1111 Highland Ave, Madison WI 53705, United States; Department of Neuroscience, University of Wisconsin, 1111 Highland Ave, Madison WI 53705, United States. Electronic address: mbjackso@wisc.edu.
University of Wisconsin–Madison · US

Funding

Single-Channel Studies of the Fusion PoreR01NS044057 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI JACKSON, MEYER B. · 2002 to 2022
$5.7M
Localization, Interactions, And Functions of Synaptotagmins in the PituitaryR01NS072905 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CHAPMAN, EDWIN R, JACKSON, MEYER B. · 2011 to 2015
$1.9M
NINDS NIH HHS R01 NS044057NINDS NIH HHS R01 NS072905NINDS NIH HHS R01NS072905NINDS NIH HHS R01NS44057
6 · The paper itself

Abstract

Imaging with Ca(2+)-sensitive fluorescent dye has provided a wealth of insight into the dynamics of cellular Ca(2+) signaling. The spatiotemporal evolution of intracellular free Ca(2+) observed in imaging experiments is shaped by binding and unbinding to cytoplasmic Ca(2+) buffers, as well as the fluorescent indicator used for imaging. These factors must be taken into account in the interpretation of Ca(2+) imaging data, and can be exploited to investigate endogenous Ca(2+) buffer properties. Here we extended the use of Ca(2+) fluorometry in the characterization of Ca(2+) binding molecules within cells, building on a method of titration of intracellular Ca(2+) binding sites in situ with measured amounts of Ca(2+) entering through voltage-gated Ca(2+) channels. We developed a systematic procedure for fitting fluorescence data acquired during a series of voltage steps to models with multiple Ca(2+) binding sites. The method was tested on simulated data, and then applied to 2-photon fluorescence imaging data from rat posterior pituitary nerve terminals patch clamp-loaded with the Ca(2+) indicator fluo-8. Focusing on data sets well described by a single endogenous Ca(2+) buffer and dye, this method yielded estimates of the endogenous buffer concentration and Kd, the dye Kd, and the fraction of Ca(2+) inaccessible cellular volume. The in situ Kd of fluo-8 thus obtained was indistinguishable from that measured in vitro. This method of calibrating Ca(2+)-sensitive fluorescent dyes in situ has significant advantages over previous methods. Our analysis of Ca(2+) titration fluorometric data makes more effective use of the experimental data, and provides a rigorous treatment of multivariate errors and multiple Ca(2+) binding species. This method offers a versatile approach to the study of endogenous Ca(2+) binding molecules in their physiological milieu.

Indexed as

Aniline CompoundsAnimalsCalciumFluorescent DyesFluorometryIn Vitro TechniquesNerve EndingsOptical ImagingPatch-Clamp TechniquesPituitary Gland, PosteriorRatsRats, Sprague-DawleyXanthenesAniline CompoundsCalciumfluo-8 AMFluorescent DyesXanthenes2-Photon microscopyCa(2+) binding proteinsCa(2+) imagingFluorescent Ca(2+) indicatorsNeurosecretion

Identifiers

PMID25465896
PMCPMC4314461
OpenAlexW2051082583

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.