Evidence map›Paper›PMID 25464900›Full record

ArticleCancer cell2014

AF10 regulates progressive H3K79 methylation and HOX gene expression in diverse AML subtypes.

Aniruddha J Deshpande, Anagha Deshpande, Amit U Sinha, Liying Chen, Jenny Chang, Ali Cihan, Maurizio Fazio, Chun-Wei Chen, Nan Zhu, Richard Koche and 10 more

Abstract read
In one paragraph

Article in Cancer cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  16. Chromatin structure in totipotent mouse early preimplantation embryos.The Journal of reproduction and development · 2024
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67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Aniruddha J DeshpandeDivision of Hematology/Oncology, Children's Hospital Boston, Boston, MA 02115, USA; Department of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Anagha DeshpandeDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Amit U SinhaDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Liying ChenDivision of Hematology/Oncology, Children's Hospital Boston, Boston, MA 02115, USA.
Jenny ChangDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Ali CihanLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Maurizio FazioDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Chun-Wei ChenDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Nan ZhuDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Richard KocheDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Liuda DzhekievaMolecular Pharmacology and Chemistry Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Gloria IbáñezMolecular Pharmacology and Chemistry Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Stuart DiasDivision of Hematology/Oncology, Children's Hospital Boston, Boston, MA 02115, USA.
Deepti BankaDivision of Hematology/Oncology, Children's Hospital Boston, Boston, MA 02115, USA.
Andrei KrivtsovDepartment of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Minkui LuoMolecular Pharmacology and Chemistry Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Robert G RoederLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
James E BradnerDepartment of Medical Oncology, Dana Farber Cancer Institute, Harvard Medical School, Boston, MA 02115, USA.
Kathrin M BerntDepartment of Pediatrics, University of Colorado Anshutz Medical Campus, Aurora, CO 80045 USA.
Scott A ArmstrongDivision of Hematology/Oncology, Children's Hospital Boston, Boston, MA 02115, USA; Department of Pediatrics and the Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA. Electronic address: armstros@mskcc.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Systems Analysis of Cancer Pathways in Mouse ModelsU01CA105423 · NCI · DANA-FARBER CANCER INSTITUTE · PI ORKIN, STUART H · 2004 to 2013
$8.4M
Targeting to Epigenetic Modications in ALLR01CA176745 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ARMSTRONG, SCOTT A, QI, JUN · 2012 to 2022
$4.2M
Molecular pathogenesis of MLL-AF4 leukemiasR01CA140575 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ARMSTRONG, SCOTT A · 2010 to 2014
$1.7M
The role of AF10 in normal and leukemic hematopoiesisR00CA154880 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI DESHPANDE, ANIRUDDHA J. · 2015 to 2017
$747k
NCI NIH HHS CA105423NCI NIH HHS CA140575NCI NIH HHS CA176745NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA08748NCI NIH HHS R00 CA154880NCI NIH HHS R01 CA140575NCI NIH HHS R01 CA176745NCI NIH HHS U01 CA105423
6 · The paper itself

Abstract

Homeotic (HOX) genes are dysregulated in multiple malignancies, including several AML subtypes. We demonstrate that H3K79 dimethylation (H3K79me2) is converted to monomethylation (H3K79me1) at HOX loci as hematopoietic cells mature, thus coinciding with a decrease in HOX gene expression. We show that H3K79 methyltransferase activity as well as H3K79me1-to-H3K79me2 conversion is regulated by the DOT1L cofactor AF10. AF10 inactivation reverses leukemia-associated epigenetic profiles, precludes abnormal HOXA gene expression, and impairs the transforming ability of MLL-AF9, MLL-AF6, and NUP98-NSD1 fusions-mechanistically distinct HOX-activating oncogenes. Furthermore, NUP98-NSD1-transformed cells are sensitive to small-molecule inhibition of DOT1L. Our findings demonstrate that pharmacological inhibition of the DOT1L/AF10 complex may provide therapeutic benefits in an array of malignancies with abnormal HOXA gene expression.

Indexed as

AdenosineAnimalsBone Marrow CellsEpigenesis, GeneticGene Expression Regulation, NeoplasticHistonesHL-60 CellsHomeodomain ProteinsHumansLeukemia, Myeloid, AcuteMethylationMethyltransferasesMiceMice, TransgenicMolecular Sequence DataNeoplasms, ExperimentalAdenosineEPZ004777HistonesHomeodomain ProteinsMethyltransferasesnuclear pore complex protein 98Nuclear Pore Complex ProteinsNuclear ProteinsOncogene Proteins, FusionPhenylurea CompoundsTranscription Factors

Identifiers

PMID25464900
PMCPMC4291116

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.