Evidence map›Paper›PMID 25463932›Full record

ArticleWater research2015

Proteomic adaptations to starvation prepare Escherichia coli for disinfection tolerance.

Zhe Du, Renu Nandakumar, Kenneth W Nickerson, Xu Li

Open access · greenAbstract read
In one paragraph

Article in Water research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Zhe DuDepartment of Civil Engineering, University of Nebraska-Lincoln, USA.
Renu NandakumarProteomics and Metabolomics Core Facility, Redox Biology Center, Department of Biochemistry, University of Nebraska-Lincoln, USA.
Kenneth W NickersonSchool of Biological Sciences, University of Nebraska-Lincoln, USA.
Xu LiDepartment of Civil Engineering, University of Nebraska-Lincoln, USA. Electronic address: xuli@unl.edu.
University of Nebraska–Lincoln · US

Funding

Redox Biology CenterP30GM103335 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI BECKER, DONALD F · 2012 to 2016
$4.3M
NIGMS NIH HHS P30 GM103335NIGMS NIH HHS P30GM103335
6 · The paper itself

Abstract

Despite the low nutrient level and constant presence of secondary disinfectants, bacterial re-growth still occurs in drinking water distribution systems. The molecular mechanisms that starved bacteria use to survive low-level chlorine-based disinfectants are not well understood. The objective of this study is to investigate these molecular mechanisms at the protein level that prepare starved cells for disinfection tolerance. Two commonly used secondary disinfectants chlorine and monochloramine, both at 1 mg/L, were used in this study. The proteomes of normal and starved Escherichia coli (K12 MG1655) cells were studied using quantitative proteomics. Over 60-min disinfection, starved cells showed significantly higher disinfection tolerance than normal cells based on the inactivation curves for both chlorine and monochloramine. Proteomic analyses suggest that starvation may prepare cells for the oxidative stress that chlorine-based disinfection will cause by affecting glutathione metabolism. In addition, proteins involved in stress regulation and stress responses were among the ones up-regulated under both starvation and chlorine/monochloramine disinfection. By comparing the fold changes under different conditions, it is suggested that starvation prepares E. coli for disinfection tolerance by increasing the expression of enzymes that can help cells survive chlorine/monochloramine disinfection. Protein co-expression analyses show that proteins in glycolysis and pentose phosphate pathway that were up-regulated under starvation are also involved in disinfection tolerance. Finally, the production and detoxification of methylglyoxal may be involved in the chlorine-based disinfection and cell defense mechanisms.

Indexed as

Adaptation, PhysiologicalDisinfectionProteomicsStress, PhysiologicalBiocatalysisChloraminesChlorineDisinfectantsEscherichia coliEscherichia coli ProteinsGene OntologyMicrobial ViabilityMolecular Sequence AnnotationOxidative StresschloramineChloraminesChlorineDisinfectantsEscherichia coli ProteinsChlorineDisinfection toleranceMonochloramineQuantitative proteomicsStarvation

Identifiers

PMID25463932
PMCPMC4351261
OpenAlexW2023052550

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.