Evidence map›Paper›PMID 25462344›Full record

ArticleVirology2015

Infection of monkeys by simian-human immunodeficiency viruses with transmitted/founder clade C HIV-1 envelopes.

Mohammed Asmal, Corinne Luedemann, Christy L Lavine, Linh V Mach, Harikrishnan Balachandran, Christie Brinkley, Thomas N Denny, Mark G Lewis, Hanne Anderson, Ranajit Pal and 11 more

Open access · greenAbstract read
In one paragraph

Article in Virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 1 country.

Mohammed AsmalCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Corinne LuedemannCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Christy L LavineCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Linh V MachCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Harikrishnan BalachandranCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Christie BrinkleyDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Thomas N DennyDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Mark G LewisBIOQUAL Inc., Rockville, MD 20852, USA.
Hanne AndersonBIOQUAL Inc., Rockville, MD 20852, USA.
Ranajit PalAdvanced BioScience Laboratories, Inc., Rockville, MD 20850, USA.
Devin SokDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Khoa LeDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Matthias PauthnerDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Beatrice H HahnUniversity of Pennsylvania, Department of Medicine and Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
George M ShawUniversity of Pennsylvania, Department of Medicine and Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Michael S SeamanCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Norman L LetvinUniversity of Pennsylvania, Department of Medicine and Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Dennis R BurtonDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Joseph G SodroskiDepartment of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02215, USA.
Barton F HaynesDuke Human Vaccine Institute, Duke University School of Medicine, Durham, NC 27710, USA.
Sampa SantraCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA. Electronic address: ssantra@bidmc.harvard.edu.
Beth Israel Deaconess Medical Center · USScripps Research Institute · USDuke University · USUniversity of Pennsylvania · USBioqual · USBioScience Laboratories (United States) · USHarvard University · US

Funding

Virus biology scientific research support componentUM1AI100645 · NIAID · DUKE UNIVERSITY · PI HAYNES, BARTON F. · 2012 to 2018
$204.7M
The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ROBERT GROSS · 1999 to 2026
$78.6M
New England Primate Research Center Base GrantP51OD011103 · OD · HARVARD MEDICAL SCHOOL · PI FLIER, JEFFREY S · 2012 to 2013
$24.7M
Penile transmission and neutralization of pathogenic SIVsmmR01AI094604 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SHAW, GEORGE M · 2011 to 2015
$3.6M
Cloning, characterization and in vivo testing of mucosally transmitted SIVR33AI087383 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SHAW, GEORGE M · 2013 to 2015
$1.4M
GENE THERAPY FOR IMMUNE DEFICIENCIESZ01AI000645 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI DE RAVIN, SUK · 1992 to 2008
$873k
Intramural NIH HHS Z01 AI000645NIAID NIH HHS P30 AI045008NIAID NIH HHS P30 AI060354NIAID NIH HHS P30-AI060354NIAID NIH HHS R01 AI094604NIAID NIH HHS R33 AI087383NIAID NIH HHS UM1-AI00645NIAID NIH HHS UM1 AI100645NIH HHS OD011103NIH HHS P51 OD011103PHS HHS 272201100022CPHS HHS 27220130000I3
6 · The paper itself

Abstract

Simian-human immunodeficiency viruses (SHIVs) that mirror natural transmitted/founder (T/F) viruses in man are needed for evaluation of HIV-1 vaccine candidates in nonhuman primates. Currently available SHIVs contain HIV-1 env genes from chronically-infected individuals and do not reflect the characteristics of biologically relevant HIV-1 strains that mediate human transmission. We chose to develop clade C SHIVs, as clade C is the major infecting subtype of HIV-1 in the world. We constructed 10 clade C SHIVs expressing Env proteins from T/F viruses. Three of these ten clade C SHIVs (SHIV KB9 C3, SHIV KB9 C4 and SHIV KB9 C5) replicated in naïve rhesus monkeys. These three SHIVs are mucosally transmissible and are neutralized by sCD4 and several HIV-1 broadly neutralizing antibodies. However, like natural T/F viruses, they exhibit low Env reactivity and a Tier 2 neutralization sensitivity. Of note, none of the clade C T/F SHIVs elicited detectable autologous neutralizing antibodies in the infected monkeys, even though antibodies that neutralized a heterologous Tier 1 HIV-1 were generated. Challenge with these three new clade C SHIVs will provide biologically relevant tests for vaccine protection in rhesus macaques.

Indexed as

AnimalsGene Expression Regulation, ViralHEK293 CellsHIV-1HumansMutationPhylogenySimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViral Envelope ProteinsViremiaViral Envelope ProteinsHIV-1 Clade CMucosal transmissionSHIVTransmitted/founder Env

Identifiers

PMID25462344
PMCPMC4280322
OpenAlexW2084959666

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.