Evidence map›Paper›PMID 25461970›Full record

ArticleThe ISME journal2015

Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections.

Chloe E James, Emily V Davies, Joanne L Fothergill, Martin J Walshaw, Colin M Beale, Michael A Brockhurst, Craig Winstanley

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 83 citations in OpenAlex.

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  14. What Makes Pseudomonas aeruginosa a Pathogen?Advances in experimental medicine and biology · 2022
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  15. Phages from GenusViruses · 2021
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  19. The Basis for Natural Multiresistance to Phage inAntibiotics (Basel, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Chloe E James1] Institute of Infection and Global Health, University of Liverpool, Liverpool, UK [2] School of Environment and Life Sciences, University of Salford, Manchester, UK.
Emily V DaviesInstitute of Infection and Global Health, University of Liverpool, Liverpool, UK.
Joanne L FothergillInstitute of Infection and Global Health, University of Liverpool, Liverpool, UK.
Martin J WalshawLiverpool Heart and Chest Hospital, Liverpool, UK.
Colin M BealeDepartment of Biology, University of York, York, UK.
Michael A BrockhurstDepartment of Biology, University of York, York, UK.
Craig WinstanleyInstitute of Infection and Global Health, University of Liverpool, Liverpool, UK.
University of Liverpool · GBUniversity of York · GBLiverpool Heart and Chest Hospital · GB

Funding

Wellcome Trust 089215Wellcome Trust 089215/Z/09/Z
6 · The paper itself

Abstract

Pseudomonas aeruginosa is the most common bacterial pathogen infecting the lungs of cystic fibrosis (CF) patients. The transmissible Liverpool epidemic strain (LES) harbours multiple inducible prophages (LESϕ2; LESϕ3; LESϕ4; LESϕ5; and LESϕ6), some of which are known to confer a competitive advantage in an in vivo rat model of chronic lung infection. We used quantitative PCR (Q-PCR) to measure the density and dynamics of all five LES phages in the sputa of 10 LES-infected CF patients over a period of 2 years. In all patients, the densities of free-LES phages were positively correlated with the densities of P. aeruginosa, and total free-phage densities consistently exceeded bacterial host densities 10-100-fold. Further, we observed a negative correlation between the phage-to-bacterium ratio and bacterial density, suggesting a role for lysis by temperate phages in regulation of the bacterial population densities. In 9/10 patients, LESϕ2 and LESϕ4 were the most abundant free phages, which reflects the differential in vitro induction properties of the phages. These data indicate that temperate phages of P. aeruginosa retain lytic activity after prolonged periods of chronic infection in the CF lung, and suggest that temperate phage lysis may contribute to regulation of P. aeruginosa density in vivo.

Indexed as

AnimalsComplement System ProteinsCystic FibrosisDisease Models, AnimalHumansLungPolymerase Chain ReactionProphagesPseudomonas aeruginosaPseudomonas InfectionsPseudomonas PhagesRespiratory Tract InfectionsSputumComplement System Proteins

Identifiers

PMID25461970
PMCPMC4351911
OpenAlexW1986037955

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.