Evidence map›Paper›PMID 25461922›Full record

ArticlePloS one2014

Identification of a novel human LAP1 isoform that is regulated by protein phosphorylation.

Mariana Santos, Sara C Domingues, Patrícia Costa, Thorsten Muller, Sara Galozzi, Katrin Marcus, Edgar F da Cruz e Silva, Odete A da Cruz e Silva, Sandra Rebelo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  4. International journal of molecular sciences · 2023
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  9. Molecular Pathology of Laminopathies.Annual review of pathology · 2022
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  10. Article
  11. Review
  12. The Diverse Cellular Functions of Inner Nuclear Membrane Proteins.Cold Spring Harbor perspectives in biology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Mariana SantosLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
Sara C DominguesLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
Patrícia CostaLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
Thorsten MullerDepartment of Functional Proteomics, Medical Proteome Center, Ruhr University Bochum, Bochum, Germany.
Sara GalozziDepartment of Functional Proteomics, Medical Proteome Center, Ruhr University Bochum, Bochum, Germany.
Katrin MarcusDepartment of Functional Proteomics, Medical Proteome Center, Ruhr University Bochum, Bochum, Germany.
Edgar F da Cruz e SilvaLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
Odete A da Cruz e SilvaLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
Sandra RebeloLaboratório de Neurociências e Sinalização, Centro de Biologia Celular, SACS, Universidade de Aveiro, Aveiro, Portugal.
University of Aveiro · PTRuhr University Bochum · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lamina associated polypeptide 1 (LAP1) is an integral protein of the inner nuclear membrane that is ubiquitously expressed. LAP1 binds to lamins and chromatin, probably contributing to the maintenance of the nuclear envelope architecture. Moreover, LAP1 also interacts with torsinA and emerin, proteins involved in DYT1 dystonia and X-linked Emery-Dreifuss muscular dystrophy disorder, respectively. Given its relevance to human pathological conditions, it is important to better understand the functional diversity of LAP1 proteins. In rat, the LAP1 gene (TOR1AIP1) undergoes alternative splicing to originate three LAP1 isoforms (LAP1A, B and C). However, it remains unclear if the same occurs with the human TOR1AIP1 gene, since only the LAP1B isoform had thus far been identified in human cells. In silico analysis suggested that, across different species, potential new LAP1 isoforms could be generated by alternative splicing. Using shRNA to induce LAP1 knockdown and HPLC-mass spectrometry analysis the presence of two isoforms in human cells was described and validated: LAP1B and LAP1C; the latter is putatively N-terminal truncated. LAP1B and LAP1C expression profiles appear to be dependent on the specific tissues analyzed and in cultured cells LAP1C was the major isoform detected. Moreover, LAP1B and LAP1C expression increased during neuronal maturation, suggesting that LAP1 is relevant in this process. Both isoforms were found to be post-translationally modified by phosphorylation and methionine oxidation and two LAP1B/LAP1C residues were shown to be dephosphorylated by PP1. This study permitted the identification of the novel human LAP1C isoform and partially unraveled the molecular basis of LAP1 regulation.

Indexed as

Alternative SplicingAnimalsDystonia Musculorum DeformansGene Expression RegulationGenomicsHSC70 Heat-Shock ProteinsHumansMethionineMuscular Dystrophy, Emery-DreifussPhosphorylationProtein IsoformsProtein Processing, Post-TranslationalRatsRNA, MessengerSequence AlignmentHSC70 Heat-Shock ProteinsHSPA8 protein, humanMethionineProtein IsoformsRNA, Messenger

Identifiers

PMID25461922
PMCPMC4252041
OpenAlexW2077254683

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.