Evidence map›Paper›PMID 25460919›Full record

ArticleDNA repair2014

5-Fluorouracil mediated anti-cancer activity in colon cancer cells is through the induction of Adenomatous Polyposis Coli: Implication of the long-patch base excision repair pathway.

Dipon Das, Ranjan Preet, Purusottam Mohapatra, Shakti Ranjan Satapathy, Sumit Siddharth, Tigist Tamir, Vaibhav Jain, Prasad V Bharatam, Michael D Wyatt, Chanakya Nath Kundu

Abstract read
In one paragraph

Article in DNA repair, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  3. Acquired resistance to molecularly targeted therapies for cancer.Cancer drug resistance (Alhambra, Calif.) · 2025
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  9. A Quassinoid Diterpenoid Eurycomanone fromMolecules (Basel, Switzerland) · 2022
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  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Dipon DasKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India.
Ranjan PreetKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India.
Purusottam MohapatraKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India.
Shakti Ranjan SatapathyKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India.
Sumit SiddharthKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India.
Tigist TamirDepartment of Drug Discovery and Biomedical Sciences, South Carolina College of Pharmacy, University of South Carolina, Columbia, SC, USA.
Vaibhav JainDepartment of Pharmacoinformatics, National Institute of Pharmaceutical Education and Research (NIPER), Sector 67, S.A.S. Nagar, Mohali, Punjab 160062, India.
Prasad V BharatamDepartment of Pharmacoinformatics, National Institute of Pharmaceutical Education and Research (NIPER), Sector 67, S.A.S. Nagar, Mohali, Punjab 160062, India.
Michael D WyattDepartment of Drug Discovery and Biomedical Sciences, South Carolina College of Pharmacy, University of South Carolina, Columbia, SC, USA.
Chanakya Nath KunduKIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa 751024, India. Electronic address: cnkundu@gmail.com.
KIIT University · INNational Institute of Pharmaceutical Education and Research · INUniversity of South Carolina · US

Funding

TISSUE BIOREPOSITORYP20RR017698 · NCRR · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI FAYAD, RAJA · 2002 to 2011
$22.5M
UofSC Postbaccalaureate Research Education ProgramR25GM066526 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI ARMSTRONG, ALISSA RICHMOND, ELY, BERT · 2004 to 2024
$5.4M
Thymineless stress, DNA repair and recombinationR01CA100450 · NCI · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI WYATT, MICHAEL D. · 2004 to 2008
$1.3M
NCI NIH HHS R01 CA100450NCRR NIH HHS P20 RR017698NIGMS NIH HHS R25 GM066526
6 · The paper itself

Abstract

Colorectal cancer (CRC) patients with APC mutations do not benefit from 5-FU therapy. It was reported that APC physically interacts with POLβ and FEN1, thus blocking LP-BER via APC's DNA repair inhibitory (DRI) domain in vitro. The aim of this study was to elucidate how APC status affects BER and the response of CRC to 5-FU. HCT-116, HT-29, and LOVO cells varying in APC status were treated with 5-FU to evaluate expression, repair, and survival responses. HCT-116 expresses wild-type APC; HT-29 expresses an APC mutant that contains DRI domain; LOVO expresses an APC mutant lacking DRI domain. 5-FU increased the expression of APC and decreased the expression of FEN1 in HCT-116 and HT-29 cells, which were sensitized to 5-FU when compared to LOVO cells. Knockdown of APC in HCT-116 rendered cells resistant to 5-FU, and FEN1 levels remained unchanged. Re-expression of full-length APC in LOVO cells caused sensitivity to 5-FU, and decreased expression of FEN1. These knockdown and addback studies confirmed that the DRI domain is necessary for the APC-mediated reduction in LP-BER and 5-FU. Modelling studies showed that 5-FU can interact with the DRI domain of APC via hydrogen bonding and hydrophobic interactions. 5-FU resistance in CRC occurs with mutations in APC that disrupt or eliminate the DRI domain's interaction with LP-BER. Understanding the type of APC mutation should better predict 5-FU resistance in CRC than simply characterizing APC status as wild-type or mutant.

Indexed as

Adenomatous Polyposis Coli ProteinAmino Acid SequenceAntimetabolites, AntineoplasticCell Line, TumorColonic NeoplasmsDNA RepairFlap EndonucleasesFluorouracilGene Knockdown TechniquesHCT116 CellsHumansHydrogen BondingMolecular Docking SimulationMolecular Sequence DataProteasome Endopeptidase ComplexProtein Structure, TertiaryAdenomatous Polyposis Coli ProteinAntimetabolites, AntineoplasticAPC protein, humanFEN1 protein, humanFlap EndonucleasesFluorouracilProteasome Endopeptidase Complex

Identifiers

PMID25460919
PMCPMC4830146
OpenAlexW1964932169

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.