Evidence map›Paper›PMID 25458836›Full record

ArticleStructure (London, England : 1993)2014

Synchronous opening and closing motions are essential for cAMP-dependent protein kinase A signaling.

Atul K Srivastava, Leanna R McDonald, Alessandro Cembran, Jonggul Kim, Larry R Masterson, Christopher L McClendon, Susan S Taylor, Gianluigi Veglia

Open access · greenAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. A PKA-selective inhibitor captures an open but more ordered conformation of the PKA catalytic subunit.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  3. Review
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  12. A Conserved Allosteric Pathway in Tyrosine Kinase Regulation.Structure (London, England : 1993) · 2019
    Article
  13. Dynamic allostery-based molecular workings of kinase:peptide complexes.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  14. Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Atul K SrivastavaDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.
Leanna R McDonaldDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.
Alessandro CembranDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA.
Jonggul KimDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA.
Larry R MastersonDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA.
Christopher L McClendonDepartment of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Susan S TaylorDepartment of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.
Gianluigi VegliaDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA; Department of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. Electronic address: vegli001@umn.edu.
University of Minnesota · USUniversity of California San Diego · US

Funding

Minnesota Craniofacial Research Training ProgramT90DE022732 · NIDCR · UNIVERSITY OF MINNESOTA · PI MANSKY, KIM CARPENTER · 2012 to 2023
$4.9M
Mapping Allosteric Cooperativity in Protein KinasesR01GM100310 · NIGMS · UNIVERSITY OF MINNESOTA · PI VEGLIA, GIANLUIGI · 2012 to 2019
$4.3M
NIDCR NIH HHS T90 DE022732NIGMS NIH HHS GM100301NIGMS NIH HHS R01 GM100310
6 · The paper itself

Abstract

Conformational fluctuations play a central role in enzymatic catalysis. However, it is not clear how the rates and the coordination of the motions affect the different catalytic steps. Here, we used NMR spectroscopy to analyze the conformational fluctuations of the catalytic subunit of the cAMP-dependent protein kinase (PKA-C), a ubiquitous enzyme involved in a myriad of cell signaling events. We found that the wild-type enzyme undergoes synchronous motions involving several structural elements located in the small lobe of the kinase, which is responsible for nucleotide binding and release. In contrast, a mutation (Y204A) located far from the active site desynchronizes the opening and closing of the active cleft without changing the enzyme's structure, rendering it catalytically inefficient. Since the opening and closing motions govern the rate-determining product release, we conclude that optimal and coherent conformational fluctuations are necessary for efficient turnover of protein kinases.

Indexed as

Amino Acid SequenceCatalysisCyclic AMPCyclic AMP-Dependent Protein KinasesMagnetic Resonance SpectroscopyModels, MolecularProtein BindingProtein ConformationSignal TransductionCyclic AMPCyclic AMP-Dependent Protein Kinases

Identifiers

PMID25458836
PMCPMC4255147
OpenAlexW1964610218

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.