Evidence map›Paper›PMID 25458086›Full record

ArticleGenomics, proteomics & bioinformatics2014

Systematic characterization of cell cycle phase-dependent protein dynamics and pathway activities by high-content microscopy-assisted cell cycle phenotyping.

Christopher Bruhn, Torsten Kroll, Zhao-Qi Wang

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Christopher BruhnLeibniz Institute for Age Research - Fritz Lipmann Institute (FLI), 07745 Jena, Germany.
Torsten KrollLeibniz Institute for Age Research - Fritz Lipmann Institute (FLI), 07745 Jena, Germany.
Zhao-Qi WangLeibniz Institute for Age Research - Fritz Lipmann Institute (FLI), 07745 Jena, Germany; Faculty of Biology and Pharmacy, Friedrich Schiller University of Jena, 07745 Jena, Germany. Electronic address: zqwang@fli-leibniz.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell cycle progression is coordinated with metabolism, signaling and other complex cellular functions. The investigation of cellular processes in a cell cycle stage-dependent manner is often the subject of modern molecular and cell biological research. Cell cycle synchronization and immunostaining of cell cycle markers facilitate such analysis, but are limited in use due to unphysiological experimental stress, cell type dependence and often low flexibility. Here, we describe high-content microscopy-assisted cell cycle phenotyping (hiMAC), which integrates high-resolution cell cycle profiling of asynchronous cell populations with immunofluorescence microscopy. hiMAC is compatible with cell types from any species and allows for statistically powerful, unbiased, simultaneous analysis of protein interactions, modifications and subcellular localization at all cell cycle stages within a single sample. For illustration, we provide a hiMAC analysis pipeline tailored to study DNA damage response and genomic instability using a 3-4-day protocol, which can be adjusted to any other cell cycle stage-dependent analysis.

Indexed as

Signal TransductionAnimalsCell CycleCell Cycle ProteinsCells, CulturedEmbryo, MammalianFibroblastsMiceMicroscopy, FluorescencePhenotypeCell Cycle ProteinsCell cycle profilingDNA damage markershiMACImagingNon-invasive cell cycle assay

Identifiers

PMID25458086
PMCPMC4411490

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.