Evidence map›Paper›PMID 25456141›Full record

ArticleCell reports2014

Systematic perturbation of cytoskeletal function reveals a linear scaling relationship between cell geometry and fitness.

Russell D Monds, Timothy K Lee, Alexandre Colavin, Tristan Ursell, Selwyn Quan, Tim F Cooper, Kerwyn Casey Huang

Abstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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  17. Experimental Evolution of Magnetite Nanoparticle Resistance inNanomaterials (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Russell D MondsBio-X Program, Stanford University, Stanford, CA 94305, USA; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA. Electronic address: rmonds@syntheticgenomics.com.
Timothy K LeeDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Alexandre ColavinBiophysics Program, Stanford University, Stanford, CA 94305, USA.
Tristan UrsellDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Selwyn QuanBio-X Program, Stanford University, Stanford, CA 94305, USA.
Tim F CooperDepartment of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA.
Kerwyn Casey HuangBio-X Program, Stanford University, Stanford, CA 94305, USA; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: kchuang@stanford.edu.

Funding

TRAINING & OUTREACH COREP50GM107615 · NIGMS · STANFORD UNIVERSITY · PI TERUEL, MARY N · 2013 to 2017
$10.9M
Molecular Biophysics Training Program at StanfordT32GM008294 · NIGMS · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 1989 to 2019
$7.4M
Engineering of cell shape and intracellular organizationDP2OD006466 · OD · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 2009 to 2009
$2.4M
NIGMS NIH HHS P50 GM107615NIGMS NIH HHS T32 GM008294NIH HHS DP2 OD006466
6 · The paper itself

Abstract

Diversification of cell size is hypothesized to have occurred through a process of evolutionary optimization, but direct demonstrations of causal relationships between cell geometry and fitness are lacking. Here, we identify a mutation from a laboratory-evolved bacterium that dramatically increases cell size through cytoskeletal perturbation and confers a large fitness advantage. We engineer a library of cytoskeletal mutants of different sizes and show that fitness scales linearly with respect to cell size over a wide physiological range. Quantification of the growth rates of single cells during the exit from stationary phase reveals that transitions between "feast-or-famine" growth regimes are a key determinant of cell-size-dependent fitness effects. We also uncover environments that suppress the fitness advantage of larger cells, indicating that cell-size-dependent fitness effects are subject to both biophysical and metabolic constraints. Together, our results highlight laboratory-based evolution as a powerful framework for studying the quantitative relationships between morphology and fitness.

Indexed as

Genetic FitnessAllelesClone CellsCytoskeletonDirected Molecular EvolutionEnvironmentEscherichia coliEscherichia coli ProteinsMutationEscherichia coli ProteinsMreB protein, E coli

Identifiers

PMID25456141
PMCPMC6586469

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.