Evidence map›Paper›PMID 25455858›Full record

ArticleChemistry & biology2014

Quorum-sensing crosstalk-driven synthetic circuits: from unimodality to trimodality.

Fuqing Wu, David J Menn, Xiao Wang

Abstract read
In one paragraph

Article in Chemistry & biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Design patterns for engineering genetic stability.Current opinion in biomedical engineering · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Evolutionary regain of lost gene circuit function.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Fuqing WuSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85287, USA.
David J MennSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85287, USA.
Xiao WangSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85287, USA. Electronic address: xiaowang@asu.edu.

Funding

Forward engineering to understand gene regulatory network topologiesR01GM106081 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, XIAO · 2014 to 2018
$1.7M
NIGMS NIH HHS GM106081NIGMS NIH HHS R01 GM106081
6 · The paper itself

Abstract

Widespread quorum-sensing (QS) enables bacteria to communicate and plays a critical role in controlling bacterial virulence. However, effects of promiscuous QS crosstalk and its implications for gene regulation and cell decision-making remain largely unknown. Here we systematically studied the crosstalk between LuxR/I and LasR/I systems and found that QS crosstalk can be dissected into signal crosstalk and promoter crosstalk. Further investigations using synthetic positive feedback circuits revealed that signal crosstalk significantly decreases a circuit's bistable potential while maintaining unimodality. Promoter crosstalk, however, reproducibly generates complex trimodal responses resulting from noise-induced state transitions and host-circuit interactions. A mathematical model that integrates the circuit's nonlinearity, stochasticity, and host-circuit interactions was developed, and its predictions of conditions for trimodality were verified experimentally. Combining synthetic biology and mathematical modeling, this work sheds light on the complex behaviors emerging from QS crosstalk, which could be exploited for therapeutics and biotechnology.

Indexed as

Models, BiologicalQuorum SensingSynthetic BiologyFeedback, PhysiologicalRepressor ProteinsSignal TransductionTemperatureTrans-ActivatorsLuxR autoinducer binding proteinsRepressor ProteinsTrans-Activators

Identifiers

PMID25455858
PMCPMC4272683

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.