Evidence map›Paper›PMID 25453938›Full record

ArticleBiomaterials2015

Design of self-assembling peptide hydrogelators amenable to bacterial expression.

Cem Sonmez, Katelyn J Nagy, Joel P Schneider

Open access · greenAbstract read
In one paragraph

Article in Biomaterials, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Peptide Tectonics: Encoded Structural Complementarity Dictates Programmable Self-Assembly.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2019
    Review
  6. Review
  7. A Two-Tailed Phosphopeptide Crystallizes to Form a Lamellar Structure.Angewandte Chemie (International ed. in English) · 2017
    Article
  8. β-hairpin peptide hydrogels for package delivery.Advanced drug delivery reviews · 2017
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Cem SonmezNational Cancer Institute, Center for Cancer Research, Frederick, MD 21701, United States; University of Delaware, Department of Chemistry and Biochemistry, Newark, DE 19716, United States.
Katelyn J NagyNational Cancer Institute, Center for Cancer Research, Frederick, MD 21701, United States; University of Delaware, Department of Chemistry and Biochemistry, Newark, DE 19716, United States.
Joel P SchneiderNational Cancer Institute, Center for Cancer Research, Frederick, MD 21701, United States. Electronic address: Joel.Schneider@nih.gov.
Frederick National Laboratory for Cancer Research · US

Funding

Design and Utility of Novel Protienaceous BiomaterialsZIABC011313 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHNEIDER, JOEL · 2010 to 2025
$19.0M
Development of antibacterial agents and materialsZIABC011314 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHNEIDER, JOEL · 2010 to 2025
$8.9M
Intramural NIH HHS ZIA BC011313Intramural NIH HHS ZIA BC011314
6 · The paper itself

Abstract

Hydrogels formed from self-assembling peptides are finding use in tissue engineering and drug delivery applications. Given the notorious difficulties associated with producing self-assembling peptides by recombinant expression, most are typically prepared by chemical synthesis. Herein, we report the design of a family of self-assembling β-hairpin peptides amenable to efficient production using an optimized bacterial expression system. Expressing peptides, EX1, EX2 and EX3 contain identical eight-residue amphiphilic β-strands connected by varying turn sequences that are responsible for ensuring chain reversal and the proper intramolecular folding and consequent self-assembly of the peptide into a hydrogel network under physiological conditions. EX1 was initially used to establish and optimize the bacterial expression system by which all the peptides could be eventually individually expressed. Expression clones were designed to allow exploration of possible fusion partners and investigate both enzymatic and chemical cleavage as means to liberate the target peptide. A systematic analysis of possible expression systems followed by fermentation optimization lead to a system in which all three peptides could be expressed as fusions with BAD-BH3, the BH3 domain of the proapoptotic BAD (Bcl-2 Associated Death) Protein. CNBr cleavage followed by purification afforded 50, 31, and 15 mg/L yields of pure EX1, EX2 and EX3, respectively. CD spectroscopy, TEM, and rheological analysis indicate that these peptides fold and assembled into well-defined fibrils that constitute hydrogels having shear-thin/recovery properties.

Indexed as

Amino Acid SequenceBacteriaCircular DichroismElectrophoresis, Polyacrylamide GelHydrogelsMicroscopy, Electron, ScanningMolecular Sequence DataMolecular WeightPeptidesPilot ProjectsProtein Structure, SecondaryRecombinant ProteinsRheologyHydrogelsPeptidesRecombinant ProteinsAssemblyExpressionHydrogelInjectablePeptide

Identifiers

PMID25453938
PMCPMC4312208
OpenAlexW2022983369

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.