Evidence map›Paper›PMID 25453752›Full record

ArticleCell reports2014

TALEN gene knockouts reveal no requirement for the conserved human shelterin protein Rap1 in telomere protection and length regulation.

Shaheen Kabir, Dirk Hockemeyer, Titia de Lange

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 64 citations in OpenAlex.

  1. Telomere Crisis Shapes Cancer Evolution.Cold Spring Harbor perspectives in biology · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Telomeres and Cancer.Life (Basel, Switzerland) · 2021
    Review
  10. The evolution of metazoan shelterin.Genes & development · 2021
    Article
  11. Review
  12. TERRA Gene Expression in Gastric Cancer: Role of hTERT.Journal of gastrointestinal cancer · 2021
    Review
  13. Non-canonical roles of canonical telomere binding proteins in cancers.Cellular and molecular life sciences : CMLS · 2021
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shaheen KabirLaboratory for Cell Biology and Genetics, The Rockefeller University, New York, NY 10065, USA.
Dirk HockemeyerDepartment of Molecular and Cellular Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Titia de LangeLaboratory for Cell Biology and Genetics, The Rockefeller University, New York, NY 10065, USA. Electronic address: delange@mail.rockefeller.edu.
Rockefeller University · USUniversity of California, Berkeley · US

Funding

MECHANISMS OF TELOMERE INDUCED SENESCENCER01AG016642 · NIA · ROCKEFELLER UNIVERSITY · PI Titia de Lange · 1999 to 2026
$11.9M
Molecular Cytology of Human Telomeres: Telomere proteinR37GM049046 · NIGMS · ROCKEFELLER UNIVERSITY · PI DE LANGE, TITIA · 2005 to 2014
$5.0M
NIA NIH HHS 5R01AG16642NIA NIH HHS R01 AG016642NIGMS NIH HHS 5R37GM49046NIGMS NIH HHS R37 GM049046
6 · The paper itself

Abstract

The conserved protein Rap1 functions at telomeres in fungi, protozoa, and vertebrates. Like yeast Rap1, human Rap1 has been implicated in telomere length regulation and repression of nonhomologous end-joining (NHEJ) at telomeres. However, mouse telomeres lacking Rap1 do not succumb to NHEJ. To determine the functions of human Rap1, we generated several transcription activator-like effector nuclease (TALEN)-mediated human cell lines lacking Rap1. Loss of Rap1 did not affect the other components of shelterin, the modification of telomeric histones, the subnuclear position of telomeres, or the 3' telomeric overhang. Telomeres lacking Rap1 did not show a DNA damage response, NHEJ, or consistent changes in their length, indicating that Rap1 does not have an important function in protection or length regulation of human telomeres. As human Rap1, like its mouse and unicellular orthologs, affects gene expression, we propose that the conservation of Rap1 reflects its role in transcriptional regulation rather than a function at telomeres.

Indexed as

Conserved SequenceGene Knockout TechniquesAnimalsCell ProliferationChromatinEndonucleasesGene Expression RegulationHumansMiceShelterin ComplexTelomereTelomere-Binding ProteinsTelomere HomeostasisTrans-ActivatorsTranscription, GeneticChromatinEndonucleasesShelterin ComplexTelomere-Binding ProteinsTERF2IP protein, humanTrans-Activators

Identifiers

PMID25453752
PMCPMC4254571
OpenAlexW2000067299

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.