Evidence map›Paper›PMID 25452749›Full record

ArticleFrontiers in microbiology2014

Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments.

Joan M Bernhard, Konstantinos Kormas, Maria G Pachiadaki, Emma Rocke, David J Beaudoin, Colin Morrison, Pieter T Visscher, Alec Cobban, Victoria R Starczak, Virginia P Edgcomb

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Environmental Adaptation Strategies of Deep-Sea Fungi.Journal of fungi (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Joan M BernhardGeology and Geophysics Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.
Konstantinos KormasDepartment of Ichthyology and Aquatic Environment, School of Agricultural Sciences, University of Thessaly Volos, Greece.
Maria G PachiadakiGeology and Geophysics Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.
Emma RockeDivision of Life Sciences, Hong Kong University of Science and Technology, Clear Water Bay Kowloon, Hong Kong.
David J BeaudoinBiology Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.
Colin MorrisonBiology Department, University of Nevada Reno Reno, NV, USA.
Pieter T VisscherDepartment of Marine Sciences, University of Connecticut Groton, CT, USA.
Alec CobbanGeology and Geophysics Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.
Victoria R StarczakBiology Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.
Virginia P EdgcombGeology and Geophysics Department, Woods Hole Oceanographic Institution Woods Hole, MA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some of the most extreme marine habitats known are the Mediterranean deep hypersaline anoxic basins (DHABs; water depth ∼3500 m). Brines of DHABs are nearly saturated with salt, leading many to suspect they are uninhabitable for eukaryotes. While diverse bacterial and protistan communities are reported from some DHAB water-column haloclines and brines, the existence and activity of benthic DHAB protists have rarely been explored. Here, we report findings regarding protists and fungi recovered from sediments of three DHAB (Discovery, Urania, L' Atalante) haloclines, and compare these to communities from sediments underlying normoxic waters of typical Mediterranean salinity. Halocline sediments, where the redoxcline impinges the seafloor, were studied from all three DHABs. Microscopic cell counts suggested that halocline sediments supported denser protist populations than those in adjacent control sediments. Pyrosequencing analysis based on ribosomal RNA detected eukaryotic ribotypes in the halocline sediments from each of the three DHABs, most of which were fungi. Sequences affiliated with Ustilaginomycotina Basidiomycota were the most abundant eukaryotic signatures detected. Benthic communities in these DHABs appeared to differ, as expected, due to differing brine chemistries. Microscopy indicated that only a low proportion of protists appeared to bear associated putative symbionts. In a considerable number of cases, when prokaryotes were associated with a protist, DAPI staining did not reveal presence of any nuclei, suggesting that at least some protists were carcasses inhabited by prokaryotic scavengers.

Indexed as

DHABsdiscoverydiversityeukaryoteL’ AtalanterRNAUrania

Identifiers

PMID25452749
PMCPMC4233946

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.