Evidence map›Paper›PMID 25452305›Full record

ArticleMolecular and cellular biology2015

Inactivation of tristetraprolin in chronic hypoxia provokes the expression of cathepsin B.

Dominik C Fuhrmann, Michaela Tausendschön, Ilka Wittig, Mirco Steger, Martina G Ding, Tobias Schmid, Nathalie Dehne, Bernhard Brüne

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Inflammation in a ferroptotic environment.Frontiers in pharmacology · 2024
    Review
  3. Article
  4. Identification ofMolecules (Basel, Switzerland) · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Dominik C FuhrmannInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany.
Michaela TausendschönInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany.
Ilka WittigFunctional Proteomics, SFB 815 Core Unit, Goethe University Frankfurt, Frankfurt, Germany.
Mirco StegerFunctional Proteomics, SFB 815 Core Unit, Goethe University Frankfurt, Frankfurt, Germany.
Martina G DingInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany.
Tobias SchmidInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany.
Nathalie DehneInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany.ORCID http://orcid.org/0000-0002-0822-2180
Bernhard BrüneInstitute of Biochemistry I/ZAFES, Goethe University Frankfurt, Frankfurt, Germany b.bruene@biochem.uni-frankfurt.de.
Goethe University Frankfurt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macrophages play important roles in many diseases and are frequently found in hypoxic areas. A chronic hypoxic microenvironment alters global cellular protein expression, but molecular details remain poorly understood. Although hypoxia-inducible factor (HIF) is an established transcription factor allowing adaption to acute hypoxia, responses to chronic hypoxia are more complex. Based on a two-dimensional differential gel electrophoresis (2D-DIGE) approach, we aimed to identify proteins that are exclusively expressed under chronic but not acute hypoxia (1% O2). One of the identified proteins was cathepsin B (CTSB), and a knockdown of either HIF-1α or -2α in primary human macrophages pointed to an HIF-2α dependency. Although chromatin immunoprecipitation (ChIP) experiments confirmed HIF-2 binding to a CTSB enhancer in acute hypoxia, an increase of CTSB mRNA was evident only under chronic hypoxia. Along those lines, CTSB mRNA stability increased at 48 h but not at 8 h of hypoxia. However, RNA stability at 8 h of hypoxia was enhanced by a knockdown of tristetraprolin (TTP). Inactivation of TTP under prolonged hypoxia was facilitated by c-Jun N-terminal kinase (JNK), and inhibition of this kinase lowered CTSB mRNA levels and stability. We postulate a TTP-dependent mechanism to explain delayed expression of CTSB under chronic hypoxia.

Indexed as

Cathepsin BCell HypoxiaCell LineHumansHypoxia-Inducible Factor 1, alpha SubunitJNK Mitogen-Activated Protein KinasesMacrophagesRNA, MessengerRNA StabilityTristetraprolinCathepsin BHypoxia-Inducible Factor 1, alpha SubunitJNK Mitogen-Activated Protein KinasesRNA, MessengerTristetraprolin

Identifiers

PMID25452305
PMCPMC4285428
OpenAlexW2162306682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.