Evidence map›Paper›PMID 25452249›Full record

ArticleAnnals of botany2015

Evaluation of the presence of arabinogalactan proteins and pectins during Quercus suber male gametogenesis.

Mário Luís Costa, Rómulo Sobral, Maria Manuela Ribeiro Costa, Maria Isabel Amorim, Sílvia Coimbra

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mário Luís CostaDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal.
Rómulo SobralDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal.
Maria Manuela Ribeiro CostaDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal.
Maria Isabel AmorimDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal.
Sílvia CoimbraDepartamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal Departamento de Biologia, Faculdade de Ciências da Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal, Center for Biodiversity, Functional & Integrative Genomics (BioFIG) and Plant Functional Biology Centre, Universidade do Minho, Campus de Gualtar, Braga 4710-057, Portugal scoimbra@fc.up.pt.
University of Minho · PTUniversidade do Porto · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsQuercus suber (cork oak) is a dominant tree of the Fagaceae in forests of the south-west Iberian Peninsula. It is monoecious with a long progamic phase that provides a comprehensive system for comparative studies in development and sexual reproduction. In this study the distribution of arabinogalactan protein (AGPs) and pectin epitopes in anthers of Q. suber was assessed to map these hydroxyproline-rich glycoproteins and the galacturonate-rich acidic polysaccharides during pollen development. Methods Immunolocalization in male flowers was performed with a set of monoclonal antibodies directed against the carbohydrate moiety that recognizes AGPs and pectins. To identify AGP genes involved in cork oak male flower development, a search was conducted for annotated AGP genes in the available transcriptome data of the Cork Oak EST Consortium database (www.corkoakdb.org). KEY

resultsUbiquitous labelling in all cell types was obtained with anti-homogalacturan antibodies for methyl-esterified pectins. In contrast, the antibody that labelled non-methyl-esterified homogalacturans had a preferential presence in microsporocyte cells walls at the beginning of pollen development. Intense labelling was obtained with anti-AGP antibodies both in the tapetum and in the intine wall near the pollen apertures and later in the generative cell wall and vegetative cell. Evaluation of the putative AGPs highly expressed in the male gametophyte was achieved by quantitative RT-PCR analysis in male and female cork oak flowers.

conclusionsFour putative AGP genes were identified that are preferentially expressed in the male flower compared with the female flower. The putative Arabidopsis thaliana orthologues of these genes are associated with preferential expression in pollen, suggesting that the AGPs probably play a significant role in cork oak reproduction.

Indexed as

Amino Acid SequenceEpitopesFlowersMolecular Sequence DataMucoproteinsOrgan SpecificityPectinsPhylogenyPlant ProteinsPollenQuercusReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain Reactionarabinogalactan proteinsEpitopesMucoproteinsPectinsPlant ProteinsAGPArabidopsis thalianaarabinogalactan proteinscork oakmale gametophytemicrosporocyte cells wallspectinspollen developmentQuercus suber

Identifiers

PMID25452249
PMCPMC4284116
OpenAlexW2335676530

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.